Evidence map›Paper›PMID 33286473›Full record

ArticleEntropy (Basel, Switzerland)2020

Entropy-Based Strategies for Rapid Pre-Processing and Classification of Time Series Data from Single-Molecule Force Experiments.

Denis Horvath, Gabriel Žoldák

Abstract read
In one paragraph

Article in Entropy (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Denis HorvathCenter for Interdisciplinary Biosciences, Technology and Innovation Park, University of Pavol Jozef Šafárik, Jesenná 5, 041 01 Košice, Slovakia.ORCID 0000-0001-9053-1419
Gabriel ŽoldákCenter for Interdisciplinary Biosciences, Technology and Innovation Park, University of Pavol Jozef Šafárik, Jesenná 5, 041 01 Košice, Slovakia.ORCID 0000-0002-5271-8837

Funding

Agentúra na Podporu Výskumu a Vývoja APVV-18-0214Agentúra na Podporu Výskumu a Vývoja APVV-18-0285Vedecká Grantová Agentúra MŠVVaŠ SR a SAV VEGA 1/0175/19
6 · The paper itself

Abstract

Recent advances in single-molecule science have revealed an astonishing number of details on the microscopic states of molecules, which in turn defined the need for simple, automated processing of numerous time-series data. In particular, large datasets of time series of single protein molecules have been obtained using laser optical tweezers. In this system, each molecular state has a separate time series with a relatively uneven composition from the point of view-point of local descriptive statistics. In the past, uncertain data quality and heterogeneity of molecular states were biased to the human experience. Because the data processing information is not directly transferable to the black-box-framework for an efficient classification, a rapid evaluation of a large number of time series samples simultaneously measured may constitute a serious obstacle. To solve this particular problem, we have implemented a supervised learning method that combines local entropic models with the global Lehmer average. We find that the methodological combination is suitable to perform a fast and simple categorization, which enables rapid pre-processing of the data with minimal optimization and user interventions.

Indexed as

entropy-based classificationsignal pre-processingsingle-protein dynamics

Identifiers

PMID33286473
PMCPMC7517239

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.