Evidence map›Paper›PMID 33282439›Full record

ArticleFood science and biotechnology2020

Performance of concanavalin A-immobilized on polyacrylate beads for the detection of human norovirus and hepatitis A virus in fecal specimens.

Songhak Kim, Susanne U Mertens-Talcott, Bipin Vaidya, Vinicius Paula Venancio, Se-Young Cho, Jong-Am Song, Boon P Chew, Joseph Kwon, Duwoon Kim

Abstract read
In one paragraph

Article in Food science and biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Songhak KimDepartment of Food Science and Technology and Foodborne Virus Research Center, Chonnam National University, Gwangju, 61186 Republic of Korea.
Susanne U Mertens-TalcottDepartment of Nutrition and Food Science, Texas A&M University, College Station, TX 77843-2252 USA.
Bipin VaidyaDepartment of Food Science and Technology and Foodborne Virus Research Center, Chonnam National University, Gwangju, 61186 Republic of Korea.
Vinicius Paula VenancioDepartment of Nutrition and Food Science, Texas A&M University, College Station, TX 77843-2252 USA.
Se-Young ChoDepartment of Food Science and Technology and Foodborne Virus Research Center, Chonnam National University, Gwangju, 61186 Republic of Korea.
Jong-Am SongBiological Disaster Analysis Group, Korea Basic Science Institute, Daejeon, 34133 Republic of Korea.
Boon P ChewDepartment of Nutrition and Food Science, Texas A&M University, College Station, TX 77843-2252 USA.
Joseph KwonBiological Disaster Analysis Group, Korea Basic Science Institute, Daejeon, 34133 Republic of Korea.
Duwoon KimDepartment of Food Science and Technology and Foodborne Virus Research Center, Chonnam National University, Gwangju, 61186 Republic of Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quantitative reverse transcription PCR (qRT-PCR) is a sensitive method for the detection of foodborne viruses in fecal samples. However, the performance of qRT-PCR depends on the efficiency of virus concentration methods. In this study, the effect of Concanavalin A (Con A)-immobilized on polyacrylate beads (Con A-PAB) on the qRT-PCR performance, in terms of sensitivity and specificity to detect foodborne viruses in human fecal specimens was compared with commercial viral RNA extraction kit (VRNA). The detection of foodborne viruses by qRT-PCR was validated by viral genome sequencing. Both Con A-PAB and VRNA methods were equally sensitive and specific for detecting hepatitis A virus in fecal specimens. Even though both methods showed high specificity (100% vs. 100%) for detecting human norovirus (HuNoV), Con A-PAB method exhibited higher sensitivity (100% vs. 42.9%) and accuracy (100% vs. 73.3%) compared to VRNA method. In conclusion, the application of Con A-PAB would improve the performance of qRT-PCR for the detection of HuNoV in fecal samples.

Indexed as

Concanavalin AHepatitis A virusHuman norovirusSensitivitySpecificity

Identifiers

PMID33282439
PMCPMC7708564

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.