Evidence map›Paper›PMID 33278865›Full record

ArticleFEBS open bio2021

Long noncoding RNAs implicated in embryonic development in Ybx1 knockout zebrafish.

Chen Huang, Bo Zhu, Dongliang Leng, Wei Ge, Xiaohua Douglas Zhang

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in FEBS open bio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Biological roles of RNA mBiomarker research · 2022
    Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Chen HuangState Key Laboratory of Quality Research in Chinese Medicine, Macau Institute for Applied Research in Medicine and Health, Macau University of Science and Technology, China.
Bo ZhuFaculty of Health Sciences, University of Macau, Taipa, China.
Dongliang LengFaculty of Health Sciences, University of Macau, Taipa, China.
Wei GeFaculty of Health Sciences, University of Macau, Taipa, China.
Xiaohua Douglas ZhangFaculty of Health Sciences, University of Macau, Taipa, China.ORCID 0000-0002-2486-7931
University of Macau · MOMacau University of Science and Technology · MO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Y-box-binding protein 1 (Ybx1, YB-1), also known as Y-box transcription factor, is involved in a variety of biological processes (BPs) and pathways, including embryogenesis, reproduction and development in vertebrates. Several noncoding RNAs regulate Ybx1 signaling. However, the role of long noncoding RNAs (lncRNAs) in embryogenesis remains incompletely understood. Here, we investigated the possible involvement of lncRNAs in Ybx1-mediated regulation of vertebrate development by performing systematic transcriptome analysis of RNA sequencing data derived from ybx1 homozygous mutant zebrafish on day 5 (day5_ybx1

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsComputational BiologyEmbryonic DevelopmentGene Knockdown TechniquesGene OntologyGene Regulatory NetworksReproducibility of ResultsRNA, Long NoncodingTranscriptomeY-Box-Binding Protein 1ZebrafishZebrafish ProteinsRNA, Long NoncodingY-Box-Binding Protein 1Ybx1 protein, zebrafishZebrafish Proteinsdeep RNA sequencinglong noncoding RNAsREDOXYBX1zebrafish embryo development

Identifiers

PMID33278865
PMCPMC8016120
OpenAlexW3110776705

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.