Evidence map›Paper›PMID 33277529›Full record

ArticleScientific reports2020

COG5 variants lead to complex early onset retinal degeneration, upregulation of PERK and DNA damage.

Sami Tabbarah, Erika Tavares, Jason Charish, Ajoy Vincent, Andrew Paterson, Matteo Di Scipio, Yue Yin, Roberto Mendoza-Londono, Jason Maynes, Elise Heon and 1 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Sami TabbarahDepartment of Ophthalmology and Vision Sciences, Faculty of Medicine, 340 College St., Toronto, M5T 3A9, Canada.
Erika TavaresProgram of Genetics and Genome Biology, The Peter Gilgan Centre for Research and Learning, 686 Bay St., Toronto, ON, M5G 0A4, Canada.
Jason CharishKrembil Discovery Tower, Krembil Research Institute, Vision Division, KDT-8-417, 60 Leonard St, Toronto, ON, M5T 2O8, Canada.
Ajoy VincentDepartment of Ophthalmology and Vision Sciences, Faculty of Medicine, 340 College St., Toronto, M5T 3A9, Canada.
Andrew PatersonProgram of Genetics and Genome Biology, The Peter Gilgan Centre for Research and Learning, 686 Bay St., Toronto, ON, M5G 0A4, Canada.
Matteo Di ScipioProgram of Genetics and Genome Biology, The Peter Gilgan Centre for Research and Learning, 686 Bay St., Toronto, ON, M5G 0A4, Canada.
Yue YinProgram of Genetics and Genome Biology, The Peter Gilgan Centre for Research and Learning, 686 Bay St., Toronto, ON, M5G 0A4, Canada.
Roberto Mendoza-LondonoDepartment of Pediatrics, Division of Clinical Genetics, The Hospital for Sick Children, 555 University ave., Toronto, ON, M5G 1X8, Canada.
Jason MaynesDepartment of Anesthesia and Pain Medicine, The Hospital for Sick Children, 555 University ave., Toronto, ON, M5G 1X8, Canada.
Elise HeonDepartment of Ophthalmology and Vision Sciences, Faculty of Medicine, 340 College St., Toronto, M5T 3A9, Canada. elise.heon@sickkids.ca.
Philippe P MonnierDepartment of Ophthalmology and Vision Sciences, Faculty of Medicine, 340 College St., Toronto, M5T 3A9, Canada. pmonnier@uhnres.utoronto.ca.
Hospital for Sick Children · CACanada Research Chairs · CAKrembil Research InstituteUniversity of Toronto · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leber congenital amaurosis (LCA), a form of autosomal recessive severe early-onset retinal degeneration, is an important cause of childhood blindness. This may be associated with systemic features or not. Here we identified COG5 compound-heterozygous variants in patients affected with a complex LCA phenotype associated with microcephaly and skeletal dysplasia. COG5 is a component of the COG complex, which facilitates retrograde Golgi trafficking; if disrupted this can result in protein misfolding. To date, variants in COG5 have been associated with a distinct congenital disorder of glycosylation (type IIi) and with a variant of Friedreich's ataxia. We show that COG5 variants can also result in fragmentation of the Golgi apparatus and upregulation of the UPR modulator, PKR-like endoplasmic reticulum kinase (PERK). In addition, upregulation of PERK induces DNA damage in cultured cells and in murine retina. This study identifies a novel role for COG5 in maintaining ER protein homeostasis and that disruption of that role results in activation of PERK and early-onset retinal degeneration, microcephaly and skeletal dysplasia. These results also highlight the importance of the UPR pathway in early-onset retinal dystrophy and as potential therapeutic targets for patients.

Indexed as

Adaptor Proteins, Vesicular TransportBone Diseases, DevelopmentalDNA DamageeIF-2 KinaseEndoplasmic Reticulum StressFemaleHumansLeber Congenital AmaurosisMaleMicrocephalyRetinaRetinal DegenerationUnfolded Protein ResponseWhole Genome SequencingAdaptor Proteins, Vesicular TransportCOG5 protein, humanEIF2AK3 protein, humaneIF-2 Kinase

Identifiers

PMID33277529
PMCPMC7718911
OpenAlexW3110390465

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.