Evidence map›Paper›PMID 33276350›Full record

ReviewPhysical biology2021

Roadmap for the multiscale coupling of biochemical and mechanical signals during development.

Pierre-François Lenne, Edwin Munro, Idse Heemskerk, Aryeh Warmflash, Laura Bocanegra-Moreno, Kasumi Kishi, Anna Kicheva, Yuchen Long, Antoine Fruleux, Arezki Boudaoud and 18 more

Abstract readReview
In one paragraph

Review in Physical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Prepatterned Tissue Stiffness Gradient Controls Organ shape and size.bioRxiv : the preprint server for biology · 2026
    Article
  2. Review
  3. Article
  4. The Mechanics of Building Functional Organs.Cold Spring Harbor perspectives in biology · 2025
    Review
  5. Article
  6. Article
  7. Reorganizing chromatin by cellular deformation.Current opinion in cell biology · 2024
    Review
  8. The Geometric Basis of Epithelial Convergent Extension.bioRxiv : the preprint server for biology · 2024
    Article
  9. Article
  10. Article
  11. A mechanism-based theory of cellular and tissue plasticity.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Mathematical modeling for developmental processes.Development, growth & differentiation · 2023
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Pierre-François LenneAix-Marseille University, CNRS, IBDM, Turing Center for Living Systems, Marseille, France.ORCID 0000-0003-1066-7506
Edwin MunroDepartment of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, United States of America.
Idse HeemskerkDepartment of Cell & Developmental Biology, University of Michigan Medical School, Ann Arbor, MI 48109, United States of America.
Aryeh WarmflashDepartment of Biosciences and Bioengineering, Rice University, Houston, TX, 77005, United States of America.
Laura Bocanegra-MorenoIST Austria, Am Campus 1, 3400 Klosterneuburg, Austria.
Kasumi KishiIST Austria, Am Campus 1, 3400 Klosterneuburg, Austria.
Anna KichevaIST Austria, Am Campus 1, 3400 Klosterneuburg, Austria.
Yuchen LongReproduction et Dévelopement des Plantes, Université de Lyon, École normale supérieure de Lyon, Université Claude Bernard Lyon 1, INRAe, CNRS, 69364 Lyon Cedex 07, France.
Antoine FruleuxReproduction et Dévelopement des Plantes, Université de Lyon, École normale supérieure de Lyon, Université Claude Bernard Lyon 1, INRAe, CNRS, 69364 Lyon Cedex 07, France.
Arezki BoudaoudReproduction et Dévelopement des Plantes, Université de Lyon, École normale supérieure de Lyon, Université Claude Bernard Lyon 1, INRAe, CNRS, 69364 Lyon Cedex 07, France.
Timothy E SaundersMechanobiology Institute, National University of Singapore, 117411, Singapore.
Paolo CaldarelliCellule Pasteur UPMC, Sorbonne Université, rue du Dr Roux, 75015 Paris, France.
Arthur MichautDepartment of Developmental and Stem Cell Biology Institut Pasteur, 75724 Paris, Cedex 15, France.
Jerome GrosDepartment of Developmental and Stem Cell Biology Institut Pasteur, 75724 Paris, Cedex 15, France.
Yonit Maroudas-SacksDepartment of Physics, Technion-Israel Institute of Technology, Haifa 32000, Israel.
Kinneret KerenDepartment of Physics, Technion-Israel Institute of Technology, Haifa 32000, Israel.
Edouard HannezoInstitute of Science and Technology Austria, Am Campus 1, 3400 Klosterneuburg, Austria.ORCID 0000-0001-6005-1561
Zev J GartnerDepartment of Pharmaceutical Chemistry, University of California, San Francisco, 600 16th St. Box 2280, San Francisco, CA 94158, United States of America.
Benjamin StormoDepartment of Biology, University of North Carolina-Chapel Hill, Chapel Hill, NC 27599 United States of America.
Amy GladfelterDepartment of Biology, University of North Carolina-Chapel Hill, Chapel Hill, NC 27599 United States of America.
Alan RodriguesLaboratory of Morphogenesis, The Rockefeller University, 1230 York Avenue, New York, NY 10065, United States of America.
Amy ShyerLaboratory of Morphogenesis, The Rockefeller University, 1230 York Avenue, New York, NY 10065, United States of America.
Nicolas MincInstitut Jacques Monod, Université de Paris, CNRS UMR7592, 15 rue Hélène Brion, 75205 Paris Cedex 13, France.
Jean-Léon MaîtreInstitut Curie, PSL Research University, Sorbonne Université, CNRS UMR3215, INSERM U934, Paris, France.
Stefano Di TaliaDepartment of Cell Biology, Duke University Medical Center, Durham NC 27710, United States of America.
Bassma KhamaisiSchool of Neurobiology, Biochemistry and Biophysics, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 6997801, Israel.
David SprinzakSchool of Neurobiology, Biochemistry and Biophysics, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv 6997801, Israel.
Sham TliliAix-Marseille University, CNRS, IBDM, Turing Center for Living Systems, Marseille, France.

Funding

Multifunctional morphogens: patterning precision and mesoderm migrationR35GM138346 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HEEMSKERK, IDSE JOANNES · 2020 to 2025
$4.3M
The physical and molecular mechanisms of intestinal villus morphogenesis and repairR01DK126376 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Zev Jordan Gartner · 2020 to 2026
$4.2M
Understanding breast cancer progression as a defect in the mechanics of tissue self-organizationU01CA244109 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GARTNER, ZEV JORDAN, GOGA, ANDREI · 2020 to 2024
$3.0M
Total synthesis of the human mammary glandDP2HD080351 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GARTNER, ZEV JORDAN · 2013 to 2013
$2.4M
Time-keeping mechanisms of embryonic cell cyclesR01GM122936 · NIGMS · DUKE UNIVERSITY · PI DI TALIA, STEFANO · 2017 to 2023
$2.0M
Wnt pathway dynamics and their role in generating self-organized ectodermal patternsR01GM126122 · NIGMS · RICE UNIVERSITY · PI WARMFLASH, ARYEH · 2018 to 2022
$1.8M
MULTIseq: multiplexing massively parallel single cell transcriptional analysis across time, space, and conditionsR01GM135462 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GARTNER, ZEV JORDAN · 2019 to 2022
$1.3M
NCI NIH HHS U01 CA244109NICHD NIH HHS DP2 HD080351NIDDK NIH HHS R01 DK126376NIGMS NIH HHS R01 GM122936NIGMS NIH HHS R01 GM126122NIGMS NIH HHS R01 GM135462NIGMS NIH HHS R35 GM138346
6 · The paper itself

Abstract

The way in which interactions between mechanics and biochemistry lead to the emergence of complex cell and tissue organization is an old question that has recently attracted renewed interest from biologists, physicists, mathematicians and computer scientists. Rapid advances in optical physics, microscopy and computational image analysis have greatly enhanced our ability to observe and quantify spatiotemporal patterns of signalling, force generation, deformation, and flow in living cells and tissues. Powerful new tools for genetic, biophysical and optogenetic manipulation are allowing us to perturb the underlying machinery that generates these patterns in increasingly sophisticated ways. Rapid advances in theory and computing have made it possible to construct predictive models that describe how cell and tissue organization and dynamics emerge from the local coupling of biochemistry and mechanics. Together, these advances have opened up a wealth of new opportunities to explore how mechanochemical patterning shapes organismal development. In this roadmap, we present a series of forward-looking case studies on mechanochemical patterning in development, written by scientists working at the interface between the physical and biological sciences, and covering a wide range of spatial and temporal scales, organisms, and modes of development. Together, these contributions highlight the many ways in which the dynamic coupling of mechanics and biochemistry shapes biological dynamics: from mechanoenzymes that sense force to tune their activity and motor output, to collectives of cells in tissues that flow and redistribute biochemical signals during development.

Indexed as

Biomechanical PhenomenaMorphogenesisSignal TransductionModels, Biologicalembryogenesismorphogenesissignalling

Identifiers

PMID33276350
PMCPMC8380410

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.