Evidence map›Paper›PMID 33276061›Full record

ArticleBiochimica et biophysica acta. General subjects2021

Thermal shift assay to probe melting of thrombin, fibrinogen, fibrin monomer, and fibrin: Gly-Pro-Arg-Pro induces a fibrin monomer-like state in fibrinogen.

J Crossen, S L Diamond

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. General subjects, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

J CrossenDepartment of Chemical and Biomolecular Engineering, Institute for Medicine and Engineering, University of Pennsylvania, Philadelphia, PA 19104, United States.. Electronic address: jcrossen@seas.upenn.edu.
S L DiamondDepartment of Chemical and Biomolecular Engineering, Institute for Medicine and Engineering, University of Pennsylvania, Philadelphia, PA 19104, United States.. Electronic address: sld@seas.upenn.edu.
University of Pennsylvania · US

Funding

TRAINING GRANT IN HEMOSTASIS AND THROMBOSIST32HL007971 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI Rodney M Camire · 2001 to 2026
$10.6M
Blood Systems BiologyR01HL103419 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI DIAMOND, SCOTT L · 2010 to 2019
$7.4M
Multiscale Analysis of TraumaU01HL131053 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI DIAMOND, SCOTT L · 2016 to 2020
$3.8M
NHLBI NIH HHS R01 HL103419NHLBI NIH HHS T32 HL007971NHLBI NIH HHS U01 HL131053
6 · The paper itself

Abstract

backgroundThrombin activates fibrinogen and binds the fibrin E-domain (K

methodsA 384-well plate thermal shift assay (TSA) with SYPRO-orange provided melting temperatures (T

resultsLarge increases in T

conclusionsTSA was a sensitive assay of protein stability and detected: (1) the effects of calcium-stabilization, (2) thrombin active site labeling, (3) fibrinogen conversion to fibrin, and (4) GPRP induced changes in fibrinogen stability being essentially equivalent to that of fibrin monomer or polymerized fibrin. SIGNIFICANCE: The low volume, high throughput assay has potential for use in understanding interactions with rare or mutant fibrin(ogen) variants.

Indexed as

Amino Acid Chloromethyl KetonesFibrinFibrin Fibrinogen Degradation ProductsFibrinogenFibrinogens, AbnormalHumansOligopeptidesProtein StabilityThrombinTransition TemperatureAmino Acid Chloromethyl KetonesFGG protein, humanFibrinFibrin Fibrinogen Degradation ProductsfibrinmonomerFibrinogenfibrinogen gamma'Fibrinogens, Abnormalglycyl-prolyl-arginyl-prolineOligopeptidesphenylalanyl-prolyl-arginine chloromethyl ketone-thrombinThrombinBleedingFibrinFibrinogenThrombinThrombosis

Identifiers

PMID33276061
PMCPMC7752828
OpenAlexW3109156591

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.