Evidence map›Paper›PMID 33274714›Full record

ArticleeLife2020

Ecological adaptation in Atlantic herring is associated with large shifts in allele frequencies at hundreds of loci.

Fan Han, Minal Jamsandekar, Mats E Pettersson, Leyi Su, Angela P Fuentes-Pardo, Brian W Davis, Dorte Bekkevold, Florian Berg, Michele Casini, Geir Dahle and 3 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
10.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 122 citations in OpenAlex.

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  6. Sperm, egg, and embryo proteins critical for genetic adaptation of herring to low salinity in the Baltic Sea.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  7. The population structure in the Baltic herring reflects natural selection and local adaptation.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 6 countries.

Fan HanDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Minal JamsandekarDepartment of Veterinary Integrative Biosciences, Texas A&M University, College Station, United States.
Mats E PetterssonDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.ORCID 0000-0002-7372-9076
Leyi SuDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Angela P Fuentes-PardoDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Brian W DavisDepartment of Veterinary Integrative Biosciences, Texas A&M University, College Station, United States.
Dorte BekkevoldNational Institute of Aquatic Resources, Technical University of Denmark, Silkeborg, Denmark.
Florian BergDepartment of Biological Sciences, University of Bergen, Bergen, Norway.ORCID 0000-0003-1543-8112
Michele CasiniDepartment of Aquatic Resources, Institute of Marine Research, Swedish University of Agricultural Sciences, Lysekil, Sweden.
Geir DahleInstitute of Marine Research, Bergen, Norway.
Edward D FarrellSchool of Biology and Environmental Science, Science Centre West, University College Dublin, Dublin, Ireland.
Arild FolkvordDepartment of Biological Sciences, University of Bergen, Bergen, Norway.ORCID 0000-0002-4763-0590
Leif AnderssonDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.ORCID 0000-0002-4085-6968
Uppsala University · SENorwegian Institute of Marine Research · NOTexas A&M University · USSwedish University of Agricultural Sciences · SETechnical University of Denmark · DKUniversity College Dublin · IE

Funding

Danish Ministry of Food, Agriculture and Fisheries 33113-B-19-154European Fisheries Fund 33113-B-19-154Knut och Alice Wallenbergs Stiftelse KAW scholarResearch Council of Norway 254774Research Council of Norway GENSINC, project 254774Vetenskapsrådet Senior professor
6 · The paper itself

Abstract

Atlantic herring is widespread in North Atlantic and adjacent waters and is one of the most abundant vertebrates on earth. This species is well suited to explore genetic adaptation due to minute genetic differentiation at selectively neutral loci. Here, we report hundreds of loci underlying ecological adaptation to different geographic areas and spawning conditions. Four of these represent megabase inversions confirmed by long read sequencing. The genetic architecture underlying ecological adaptation in herring deviates from expectation under a classical infinitesimal model for complex traits because of large shifts in allele frequencies at hundreds of loci under selection.

Indexed as

Evolution, MolecularGene FrequencyGenetic LociPolymorphism, Single NucleotideSelection, GeneticAcclimatizationAnimalsAtlantic OceanFishesPopulation DynamicsReproductionSeasonsTranscriptomeWhole Genome SequencingAtlantic herringecologyevolutionevolutionary biologygenetic adaptationgeneticsgenomicsgenotypeinversion

Identifiers

PMID33274714
PMCPMC7738190
OpenAlexW3110382400

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.