Evidence map›Paper›PMID 33273565›Full record

ArticleScientific reports2020

Quantification and epigenetic evaluation of the residual pool of hepatitis B covalently closed circular DNA in long-term nucleoside analogue-treated patients.

Fanny Lebossé, Aurore Inchauspé, Maëlle Locatelli, Clothilde Miaglia, Audrey Diederichs, Judith Fresquet, Fleur Chapus, Kamal Hamed, Barbara Testoni, Fabien Zoulim

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 39 citations in OpenAlex.

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  16. Evaluation of the HBV liver reservoir with fine needle aspirates.JHEP reports : innovation in hepatology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Fanny LebosséINSERM U1052-Cancer Research Center of Lyon (CRCL), Lyon, France.
Aurore InchauspéINSERM U1052-Cancer Research Center of Lyon (CRCL), Lyon, France.
Maëlle LocatelliINSERM U1052-Cancer Research Center of Lyon (CRCL), Lyon, France.
Clothilde MiagliaINSERM U1052-Cancer Research Center of Lyon (CRCL), Lyon, France.
Audrey DiederichsINSERM U1052-Cancer Research Center of Lyon (CRCL), Lyon, France.
Judith FresquetINSERM U1052-Cancer Research Center of Lyon (CRCL), Lyon, France.
Fleur ChapusINSERM U1052-Cancer Research Center of Lyon (CRCL), Lyon, France.
Kamal HamedNovartis Pharmaceuticals Corporation, East Hanover, NJ, USA.
Barbara TestoniINSERM U1052-Cancer Research Center of Lyon (CRCL), Lyon, France. barbara.testoni@inserm.fr.
Fabien ZoulimINSERM U1052-Cancer Research Center of Lyon (CRCL), Lyon, France. fabien.zoulim@inserm.fr.
Université Claude Bernard Lyon 1 · FRCentre de Recherche en Cancérologie de Lyon · FRInserm · FRHospices Civils de Lyon · FRNovartis (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis B virus (HBV) covalently closed circular (ccc)DNA is the key genomic form responsible for viral persistence and virological relapse after treatment withdrawal. The assessment of residual intrahepatic cccDNA levels and activity after long-term nucleos(t)ide analogues therapy still represents a technical challenge. Quantitative (q)PCR, rolling circle amplification (RCA) and droplet digital (dd)PCR assays were used to quantify residual intrahepatic cccDNA in liver biopsies from 56 chronically HBV infected patients after 3 to 5 years of telbivudine treatment. Activity of residual cccDNA was evaluated by quantifying 3.5 kB HBV RNA (preC/pgRNA) and by assessing cccDNA-associated histone tails post-transcriptional modifications (PTMs) by micro-chromatin immunoprecipitation. Long-term telbivudine treatment resulted in serum HBV DNA suppression, with most of the patients reaching undetectable levels. Despite 38 out of 56 patients had undetectable cccDNA when assessed by qPCR, RCA and ddPCR assays detected cccDNA in all-but-one negative samples. Low preC/pgRNA level in telbivudine-treated samples was associated with enrichment for cccDNA histone PTMs related to repressed transcription. No difference in cccDNA levels was found according to serum viral markers evolution. This panel of cccDNA evaluation techniques should provide an added value for the new proof-of-concept clinical trials aiming at a functional cure of chronic hepatitis B.

Indexed as

Epigenesis, GeneticAdultBiomarkersBiopsyDNA, CircularDNA, ViralFemaleHepatitis BHumansLiverMaleNucleosidesTelbivudineTreatment OutcomeBiomarkersDNA, CircularDNA, ViralNucleosidesTelbivudine

Identifiers

PMID33273565
PMCPMC7712874
OpenAlexW3107667683

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.