Evidence map›Paper›PMID 33270801›Full record

ArticlePLoS pathogens2020

Impact of vaginal microbiome communities on HIV antiretroviral-based pre-exposure prophylaxis (PrEP) drug metabolism.

Ryan K Cheu, Andrew T Gustin, Christina Lee, Luca Schifanella, Charlene J Miller, Avie Ha, Casey Kim, Violeta J Rodriguez, Margaret Fischl, Adam D Burgener and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
0.5field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

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  14. Interactions between microbiota and cervical epithelial, immune, and mucus barrier.Frontiers in cellular and infection microbiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Ryan K CheuDepartment of Pharmaceutics, University of Washington, Seattle, Washington, United States of America.
Andrew T GustinDepartment of Pharmaceutics, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0002-8760-8320
Christina LeeDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0002-9393-2178
Luca SchifanellaDivision of Surgical Outcomes and Precision Medicine Research, Department of Surgery, University of Minnesota, Minneapolis, Minnesota, United States of America.ORCID 0000-0002-6123-536X
Charlene J MillerDepartment of Pharmaceutics, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0002-0090-6465
Avie HaDepartment of Pharmaceutics, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0003-2769-3567
Casey KimDepartment of Pharmaceutics, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0002-7109-6076
Violeta J RodriguezDepartment of Medicine, University of Miami Miller School of Medicine, Miami, Florida, United States of America.ORCID 0000-0001-8543-2061
Margaret FischlDepartment of Medicine, University of Miami Miller School of Medicine, Miami, Florida, United States of America.ORCID 0000-0001-9241-5390
Adam D BurgenerDepartment of Medical Microbiology and Infectious Diseases, University of Manitoba, Winnipeg, Manitoba, Canada.
Kelly B ArnoldDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0003-4756-7461
Maria L AlcaideDepartment of Medicine, University of Miami Miller School of Medicine, Miami, Florida, United States of America.ORCID 0000-0003-4648-0145
Nichole R KlattDepartment of Pharmaceutics, University of Washington, Seattle, Washington, United States of America.
University of Miami · USUniversity of Minnesota · USUniversity of Michigan · USUniversity of Washington · USCenter for Global Health · US

Funding

Miami Womens Interagency HIV Study WIHSU01AI103397 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI FISCHL, MARGARET A, METSCH, LISA R · 2013 to 2018
$9.6M
Mechanisms underlying recurrent bacterial vaginosis and HIV risk A Multidisciplinary approachR01AI138718 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ALCAIDE, MARIA LUISA · 2018 to 2023
$3.5M
Targeting novel pathways to enhance gastrointestinal integrity during HIV infectionR01DK112254 · NIDDK · UNIVERSITY OF WASHINGTON · PI BURGENER, ADAM, KLATT, NICHOLE ROSE · 2017 to 2021
$1.8M
NIAID NIH HHS R01 AI138718NIAID NIH HHS U01 AI103397NIDDK NIH HHS R01 DK112254
6 · The paper itself

Abstract

Despite the efficacy of antiretroviral-based pre-exposure prophylactics (PrEP) in men who have sex with men, studies in women have produced widely varying outcomes. Recent evidence demonstrates that vaginal microbial communities are associated with increased HIV acquisition risk and may impact PrEP efficacy. Here, we investigate the mechanisms underlying how vaginal bacteria alter PrEP drug levels and impact HIV infection rates ex vivo. Using cervicovaginal lavages (CVLs) from women with or without bacterial vaginosis (BV), we identified microbial metabolism of PrEP drugs in BV samples through LC-MS/MS analysis of soluble drug levels and metabolite formation in dual T-cell cultures. CVL samples were assessed for microbiome analysis using sequencing of bacterial 16S rRNA genes. We also observed non-Lactobacillus bacteria that are associated with BV may potentially impact PrEP efficacy through increased HIV infection rates in co-cultures containing Lactobacillus or BV bacteria, PrEP drugs, CEM-GFP cells, and HIV-1LAI virus. Finally, we used these data to develop a novel predictive mathematical simulation modeling system to predict these drug interactions for future trials. These studies demonstrate how dysbiotic vaginal microbiota may impact PrEP drugs and provides evidence linking vaginal bacteria to PrEP efficacy in women.

Indexed as

AdultAnti-HIV AgentsAnti-Retroviral AgentsChromatography, LiquidDysbiosisFemaleHIV-1HIV InfectionsHumansMicrobiotaPre-Exposure ProphylaxisRNA, Ribosomal, 16STandem Mass SpectrometryTreatment OutcomeVaginaVaginosis, BacterialAnti-HIV AgentsAnti-Retroviral AgentsRNA, Ribosomal, 16S

Identifiers

PMID33270801
PMCPMC7714160
OpenAlexW3107661229

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.