Evidence map›Paper›PMID 33267886›Full record

ArticleMalaria journal2020

Estimating malaria incidence from routine health facility-based surveillance data in Uganda.

Adrienne Epstein, Jane Frances Namuganga, Emmanuel Victor Kamya, Joaniter I Nankabirwa, Samir Bhatt, Isabel Rodriguez-Barraquer, Sarah G Staedke, Moses R Kamya, Grant Dorsey, Bryan Greenhouse

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Adrienne EpsteinDepartment of Medicine, University of California, San Francisco, 550 16th Street, San Francisco, CA, 94158, USA. adrienne.epstein@ucsf.edu.ORCID http://orcid.org/0000-0002-8253-6102
Jane Frances NamugangaInfectious Diseases Research Collaboration, Kampala, Uganda.
Emmanuel Victor KamyaInfectious Diseases Research Collaboration, Kampala, Uganda.
Joaniter I NankabirwaInfectious Diseases Research Collaboration, Kampala, Uganda.
Samir BhattDepartment of Infectious Disease Epidemiology, St Marys Hospital, Imperial College, London, UK.
Isabel Rodriguez-BarraquerDepartment of Medicine, University of California, San Francisco, 550 16th Street, San Francisco, CA, 94158, USA.
Sarah G StaedkeLondon School of Hygiene and Tropical Medicine, London, UK.
Moses R KamyaInfectious Diseases Research Collaboration, Kampala, Uganda.
Grant DorseyDepartment of Medicine, University of California, San Francisco, 550 16th Street, San Francisco, CA, 94158, USA.
Bryan GreenhouseDepartment of Medicine, University of California, San Francisco, 550 16th Street, San Francisco, CA, 94158, USA.
Infectious Diseases Research Collaboration · UGUniversity of California, San Francisco · USLondon School of Hygiene & Tropical Medicine · GBSt Mary's Hospital · GB

Funding

Transmission ProjectU19AI089674 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MATTHEW G DORSEY, MOSES Robert KAMYA · 2010 to 2026
$29.3M
Impact of malaria control interventions on the infectious reservoir, host immunity, and drug resistance in UgandaK43TW010365 · FIC · INFECTIOUS DISEASES RES COLLABORATION · PI NANKABIRWA, JOANITER IMMACULATE · 2017 to 2021
$514k
Mapping malaria incidence using health facility surveillance data in UgandaF31AI150029 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI EPSTEIN, ADRIENNE · 2020 to 2021
$59k
FIC NIH HHS K43 TW010365FIC NIH HHS K43TW010365Medical Research Council MR/R015600/1National Institute of Allergy and Infectious Diseases F31AI150029National Institute of Allergy and Infectious Diseases U19AI089674NIAID NIH HHS F31 AI150029NIAID NIH HHS U19 AI089674
6 · The paper itself

Abstract

backgroundAccurate measures of malaria incidence are essential to track progress and target high-risk populations. While health management information system (HMIS) data provide counts of malaria cases, quantifying the denominator for incidence using these data is challenging because catchment areas and care-seeking behaviours are not well defined. This study's aim was to estimate malaria incidence using HMIS data by adjusting the population denominator accounting for travel time to the health facility.

methodsOutpatient data from two public health facilities in Uganda (Kihihi and Nagongera) over a 3-year period (2011-2014) were used to model the relationship between travel time from patient village of residence (available for each individual) to the facility and the relative probability of attendance using Poisson generalized additive models. Outputs from the model were used to generate a weighted population denominator for each health facility and estimate malaria incidence. Among children aged 6 months to 11 years, monthly HMIS-derived incidence estimates, with and without population denominators weighted by probability of attendance, were compared with gold standard measures of malaria incidence measured in prospective cohorts.

resultsA total of 48,898 outpatient visits were recorded across the two sites over the study period. HMIS incidence correlated with cohort incidence over time at both study sites (correlation in Kihihi = 0.64, p < 0.001; correlation in Nagongera = 0.34, p = 0.045). HMIS incidence measures with denominators unweighted by probability of attendance underestimated cohort incidence aggregated over the 3 years in Kihihi (0.5 cases per person-year (PPY) vs 1.7 cases PPY) and Nagongera (0.3 cases PPY vs 3.0 cases PPY). HMIS incidence measures with denominators weighted by probability of attendance were closer to cohort incidence, but remained underestimates (1.1 cases PPY in Kihihi and 1.4 cases PPY in Nagongera).

conclusionsAlthough malaria incidence measured using HMIS underestimated incidence measured in cohorts, even when adjusting for probability of attendance, HMIS surveillance data are a promising and scalable source for tracking relative changes in malaria incidence over time, particularly when the population denominator can be estimated by incorporating information on village of residence.

Indexed as

ChildChild, PreschoolHealth FacilitiesHealth Information SystemsHumansIncidenceInfantMalariaModels, StatisticalPublic Health SurveillanceTime FactorsUgandaHealth facilityHealth management information systemIncidenceMalariaSurveillanceUganda

Identifiers

PMID33267886
PMCPMC7709253
OpenAlexW3110169088

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.