Evidence map›Paper›PMID 33266082›Full record

ArticleMicroorganisms2020

The Utilization of Linear Polylysine Coupled with Mechanic Forces to Extract Microbial DNA from Different Matrices.

Celia François, Celia Martinez, Clement Faye, Nathalie Pansu, Catherine Dunyach-Remy, Laurent Garrelly, Benoit Roig, Axelle Cadiere

Abstract read
In one paragraph

Article in Microorganisms, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Celia FrançoisGl-Biocontrol, 34830 Clapiers, France.
Celia MartinezGl-Biocontrol, 34830 Clapiers, France.
Clement FayeGl-Biocontrol, 34830 Clapiers, France.
Nathalie PansuInstitute National de la Santé et de la Recherche Médicale, U1047, University Montpellier, UFR de Médecine, 30908 Nimes, France.
Catherine Dunyach-RemyInstitute National de la Santé et de la Recherche Médicale, U1047, University Montpellier, UFR de Médecine, 30908 Nimes, France.ORCID 0000-0001-6884-470X
Laurent GarrellyGl-Biocontrol, 34830 Clapiers, France.
Benoit RoigEA7352 CHROME, University Nimes, Rue du Dr G. Salan, CEDEX 1, 30021 Nimes, France.
Axelle CadiereEA7352 CHROME, University Nimes, Rue du Dr G. Salan, CEDEX 1, 30021 Nimes, France.ORCID 0000-0001-8070-2077

Funding

DGA « Direction générale de l'armement » within RAPID program. no grant number
6 · The paper itself

Abstract

Molecular approaches are powerful tools that are used for medical or environmental diagnoses. However, the main limitations of such a tools are that they extract low levels of DNA and they do not remove the inhibitors of polymerase chain reaction (PCR). Although the use of polycation to complex and purify DNA has been described in the literature, elution often requires a high ionic strength or pH levels not compatible with molecular analyses. In this paper, we described a new process that is based on the complexation of DNA with linear polylysine, followed by capturing the complex by a cation exchange resin. The originality of the process consisted of using mechanic force to elute DNA from the complex. The extraction method showed several advantages when compared to existing methods, such as being compatible with pH levels that range from 5 to 11, as well as high levels of DNA recovery and elimination of PCR inhibitors from complex samples. This method was successfully applied to different types of samples, such as environmental samples, beverage samples, and medical samples. Furthermore, it was proven to be a good solution for removing PCR inhibitors and assuring good DNA recovery yield.

Indexed as

complex sampleslinear polylysinePCR inhibitorspurification DNA

Identifiers

PMID33266082
PMCPMC7760326

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.