Evidence map›Paper›PMID 33264629›Full record

ArticleCell reports2020

Optogenetic Tuning Reveals Rho Amplification-Dependent Dynamics of a Cell Contraction Signal Network.

Dominic Kamps, Johannes Koch, Victor O Juma, Eduard Campillo-Funollet, Melanie Graessl, Soumya Banerjee, Tomáš Mazel, Xi Chen, Yao-Wen Wu, Stephanie Portet and 3 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
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  6. Research progress on ferroptosis in drug resistance and therapy of gastric cancer.Journal of cancer research and clinical oncology · 2025
    Review
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  11. Article
  12. Article
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  14. Patterning of the cell cortex by Rho GTPases.Nature reviews. Molecular cell biology · 2024
    Review
  15. Article
  16. Review
  17. Shining a light on RhoA: Optical control of cell contractility.The international journal of biochemistry & cell biology · 2023
    Review
  18. Mechanosensitive stem cell fate choice is instructed by dynamic fluctuations in activation of Rho GTPases.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 7 countries.

Dominic KampsDepartment of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, 44227 Dortmund, Germany; Faculty of Chemistry and Chemical Biology, TU Dortmund University, 44227 Dortmund, Germany.
Johannes KochDepartment of Molecular Cell Biology, Center for Medical Biotechnology, University of Duisburg-Essen, 45141 Essen, Germany.
Victor O JumaDepartment of Mathematics, University of Sussex, Pevensey III, Brighton BN1 9QH, UK.
Eduard Campillo-FunolletDepartment of Mathematics, University of Sussex, Pevensey III, Brighton BN1 9QH, UK.
Melanie GraesslDepartment of Molecular Cell Biology, Center for Medical Biotechnology, University of Duisburg-Essen, 45141 Essen, Germany.
Soumya BanerjeeDepartment of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, 44227 Dortmund, Germany; Faculty of Chemistry and Chemical Biology, TU Dortmund University, 44227 Dortmund, Germany.
Tomáš MazelDepartment of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, 44227 Dortmund, Germany; Faculty of Chemistry and Chemical Biology, TU Dortmund University, 44227 Dortmund, Germany.
Xi ChenChemical Genomics Centre of the Max-Planck Society, 44227 Dortmund, Germany; The HIT Center for Life Sciences, Harbin Institute of Technology, Harbin, P.R. China.
Yao-Wen WuChemical Genomics Centre of the Max-Planck Society, 44227 Dortmund, Germany; Department of Chemistry, Umeå Centre for Microbial Research, Umeå University, 901 87 Umeå, Sweden.
Stephanie PortetDepartment of Mathematics, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.
Anotida MadzvamuseDepartment of Mathematics, University of Sussex, Pevensey III, Brighton BN1 9QH, UK; Department of Mathematics, University of Johannesburg, South Africa; Universita degli Studi di Bari Aldo Moro, Bari, Italy.
Perihan NalbantDepartment of Molecular Cell Biology, Center for Medical Biotechnology, University of Duisburg-Essen, 45141 Essen, Germany.
Leif DehmeltDepartment of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, 44227 Dortmund, Germany; Faculty of Chemistry and Chemical Biology, TU Dortmund University, 44227 Dortmund, Germany. Electronic address: leif.dehmelt@mpi-dortmund.mpg.de.
TU Dortmund University · DEUniversity of Duisburg-Essen · DEUniversity of Sussex · GBChemical Genomics Centre · DEMax Planck Institute of Molecular Physiology · DEMax Planck Society · DEUniversity of Johannesburg · ZAUniversity of Manitoba · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Local cell contraction pulses play important roles in tissue and cell morphogenesis. Here, we improve a chemo-optogenetic approach and apply it to investigate the signal network that generates these pulses. We use these measurements to derive and parameterize a system of ordinary differential equations describing temporal signal network dynamics. Bifurcation analysis and numerical simulations predict a strong dependence of oscillatory system dynamics on the concentration of GEF-H1, an Lbc-type RhoGEF, which mediates the positive feedback amplification of Rho activity. This prediction is confirmed experimentally via optogenetic tuning of the effective GEF-H1 concentration in individual living cells. Numerical simulations show that pulse amplitude is most sensitive to external inputs into the myosin component at low GEF-H1 concentrations and that the spatial pulse width is dependent on GEF-H1 diffusion. Our study offers a theoretical framework to explain the emergence of local cell contraction pulses and their modulation by biochemical and mechanical signals.

Indexed as

AnimalsHumansOptogeneticsrho GTP-Binding ProteinsSignal Transductionrho GTP-Binding Proteinscell contractioncytoskeletondynamical systemmechanotransductionmyosinoptogeneticsoscillationsparameter inferencereaction-diffusion systemrho GTPase

Identifiers

PMID33264629
PMCPMC7710677
OpenAlexW3108837341

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.