Evidence map›Paper›PMID 33264609›Full record

ArticleCell reports2020

Nutrient Signaling, Stress Response, and Inter-organelle Communication Are Non-canonical Determinants of Cell Fate.

N Ezgi Wood, Piya Kositangool, Hanaa Hariri, Ashley J Marchand, W Mike Henne

Abstract read
In one paragraph

Article in Cell reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Increased mesoscale diffusivity in response to acute glucose starvation.bioRxiv : the preprint server for biology · 2023
    Article
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  7. Article
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  9. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

N Ezgi WoodDepartment of Cell Biology, UT Southwestern Medical Center, 6000 Harry Hines Blvd., Dallas, TX 75390, USA. Electronic address: nezgiwood@gmail.com.
Piya KositangoolDepartment of Cell Biology, UT Southwestern Medical Center, 6000 Harry Hines Blvd., Dallas, TX 75390, USA; Paul L. Foster School of Medicine, Texas Tech University Health Sciences Center, 5001 El Paso Dr., El Paso, TX 79905, USA.
Hanaa HaririDepartment of Cell Biology, UT Southwestern Medical Center, 6000 Harry Hines Blvd., Dallas, TX 75390, USA.
Ashley J MarchandDepartment of Cell Biology, UT Southwestern Medical Center, 6000 Harry Hines Blvd., Dallas, TX 75390, USA; Department of Veterinary Pathobiology, Texas A&M University, College Station, TX 77843, USA.
W Mike HenneDepartment of Cell Biology, UT Southwestern Medical Center, 6000 Harry Hines Blvd., Dallas, TX 75390, USA. Electronic address: mike.henne@utsouthwestern.edu.

Funding

Spatial determinants in lipid metabolic organization at the sub-organelle levelR35GM119768 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Mike Henne · 2016 to 2026
$4.1M
Mechanisms of lipid droplet organization and functional diversificationR01DK126887 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI Mike Henne, sarah huen · 2021 to 2026
$2.4M
NIDDK NIH HHS R01 DK126887NIGMS NIH HHS R35 GM119768
6 · The paper itself

Abstract

Isogenic cells manifest distinct cellular fates for a single stress; however, the nongenetic mechanisms driving such fates remain poorly understood. Here, we implement a robust multi-channel live-cell imaging approach to uncover noncanonical factors governing cell fate. We show that in response to acute glucose removal (AGR), budding yeast undergoes distinct fates, becoming either quiescent or senescent. Senescent cells fail to resume mitotic cycles following glucose replenishment but remain responsive to nutrient stimuli. Whereas quiescent cells manifest starvation-induced adaptation, senescent cells display perturbed endomembrane trafficking and defective nucleus-vacuole junction (NVJ) expansion. Surprisingly, senescence occurs even in the absence of lipid droplets. Importantly, we identify the nutrient-sensing kinase Rim15 as a key biomarker predicting cell fates before AGR stress. We propose that isogenic yeast challenged with acute nutrient shortage contains determinants influencing post-stress fate and demonstrate that specific nutrient signaling, stress response, trafficking, and inter-organelle biomarkers are early indicators for long-term fate outcomes.

Indexed as

Cell DifferentiationCellular SenescenceHumansSignal TransductionStress, PhysiologicalBayesian analysiscell cyclecellular decision makingLDlipid dropletnucleus-vacuole junctionNVJquantitative imagingquiescencesenescencestatistical evidence

Identifiers

PMID33264609
PMCPMC9744185

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.