Evidence map›Paper›PMID 33264292›Full record

ArticlePloS one2020

Enhanced detection of cell-free DNA (cfDNA) enables its use as a reliable biomarker for diagnosis and prognosis of gastric cancer.

Jiyoon Bu, Tae Hee Lee, Woo-Jin Jeong, Michael J Poellmann, Kara Mudd, Hyuk Soo Eun, Elizabeth W Liu, Seungpyo Hong, Sung Hee Hyun

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 2 pooled it
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 2 syntheses or guidelines pooled it, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Jiyoon BuPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI, United States of America.ORCID 0000-0002-0153-5109
Tae Hee LeeDepartment of Senior Healthcare, BK21 plus program, Graduated School, Eulji University, Daejeon, Republic of Korea.ORCID 0000-0002-1975-2961
Woo-Jin JeongPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI, United States of America.
Michael J PoellmannPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI, United States of America.
Kara MuddPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI, United States of America.
Hyuk Soo EunDivison of Gastroenterology and Hepatology, Department of Internal Medicine, Chungnam National University Hospital, Daejeon, Republic of Korea.
Elizabeth W LiuPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI, United States of America.
Seungpyo HongPharmaceutical Sciences Division, School of Pharmacy, University of Wisconsin-Madison, Madison, WI, United States of America.ORCID 0000-0001-9870-031X
Sung Hee HyunDepartment of Senior Healthcare, BK21 plus program, Graduated School, Eulji University, Daejeon, Republic of Korea.ORCID 0000-0002-3470-5928
University of Wisconsin–Madison · USChungnam National University · KRChungnam National University Hospital · KREulji University · KR

Funding

Project 4: Role of Receptor Tyrosine Kinase AXL in HNSCC Therapy ResistanceP50DE026787 · NIDCR · UNIVERSITY OF WISCONSIN-MADISON · PI YU, MENGGANG · 2016 to 2020
$10.8M
NIDCR NIH HHS P50 DE026787
6 · The paper itself

Abstract

Although circulating cell-free DNA (cfDNA) is a promising biomarker for the diagnosis and prognosis of various tumors, clinical correlation of cfDNA with gastric cancer has not been fully understood. To address this, we developed a highly sensitive cfDNA capture system by integrating polydopamine (PDA) and silica. PDA-silica hybrids incorporated different molecular interactions to a single system, enhancing cfDNA capture by 1.34-fold compared to the conventional silica-based approach (p = 0.001), which was confirmed using cell culture supernatants. A clinical study using human plasma samples revealed that the diagnostic accuracy of the new system to be superior than the commercially available cfDNA kit, as well as other serum antigen tests. Among the cancer patients, plasma cfDNA levels exhibited a good correlation with the size of a tumor. cfDNA was also predicative of distant metastasis, as the median cfDNA levels of metastatic cancer patients were ~60-fold higher than those without metastasis (p = 0.008). Furthermore, high concordance between tissue biopsy and cfDNA genomic analysis was found, as HER2 expression in cfDNA demonstrated an area under ROC curve (AUC) of 0.976 (p <0.001) for detecting patients with HER2-positive tumors. The new system also revealed high prognostic capability of cfDNA, as the concentration of cfDNA was highly associated with the survival outcomes. Our novel technology demonstrates the potential to achieve efficient detection of cfDNA that may serve as a reliable biomarker for gastric tumor.

Indexed as

Early Detection of CancerAdultAgedAged, 80 and overBiomarkers, TumorCell-Free Nucleic AcidsFemaleHumansMaleMiddle AgedPrognosisSilicon DioxideStomach NeoplasmsBiomarkers, TumorCell-Free Nucleic AcidsSilicon Dioxide

Identifiers

PMID33264292
PMCPMC7710035
OpenAlexW3106552829

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.