Evidence map›Paper›PMID 33262425›Full record

ArticleScientific reports2020

Transfer learning with chest X-rays for ER patient classification.

Jonathan Stubblefield, Mitchell Hervert, Jason L Causey, Jake A Qualls, Wei Dong, Lingrui Cai, Jennifer Fowler, Emily Bellis, Karl Walker, Jason H Moore and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. COVID19 Diagnosis Using Chest X-rays and Transfer Learning.medRxiv : the preprint server for health sciences · 2022
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Jonathan StubblefieldCenter for No-Boundary Thinking (CNBT) at Arkansas State University, The Joint Translational Research Lab of Arkansas State University, St. Bernards Medical Center, Jonesboro, AR, 72467, USA.
Mitchell HervertCenter for No-Boundary Thinking (CNBT) at Arkansas State University, The Joint Translational Research Lab of Arkansas State University, St. Bernards Medical Center, Jonesboro, AR, 72467, USA.
Jason L CauseyCenter for No-Boundary Thinking (CNBT) at Arkansas State University, The Joint Translational Research Lab of Arkansas State University, St. Bernards Medical Center, Jonesboro, AR, 72467, USA.
Jake A QuallsCenter for No-Boundary Thinking (CNBT) at Arkansas State University, The Joint Translational Research Lab of Arkansas State University, St. Bernards Medical Center, Jonesboro, AR, 72467, USA.
Wei DongAnn Arbor Algorithms, Ann Arbor, MI, 48103, USA.
Lingrui CaiAnn Arbor Algorithms, Ann Arbor, MI, 48103, USA.
Jennifer FowlerCenter for No-Boundary Thinking (CNBT) at Arkansas State University, The Joint Translational Research Lab of Arkansas State University, St. Bernards Medical Center, Jonesboro, AR, 72467, USA.
Emily BellisCenter for No-Boundary Thinking (CNBT) at Arkansas State University, The Joint Translational Research Lab of Arkansas State University, St. Bernards Medical Center, Jonesboro, AR, 72467, USA.
Karl WalkerDepartment of Mathematics and Computer Science, University of Arkansas At Pine Bluff, Pine Bluff, AR, 55455, USA.
Jason H MooreInstitute for Biomedical Informatics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Sara NehringCenter for No-Boundary Thinking (CNBT) at Arkansas State University, The Joint Translational Research Lab of Arkansas State University, St. Bernards Medical Center, Jonesboro, AR, 72467, USA. smnehring@sbrmc.org.
Xiuzhen HuangCenter for No-Boundary Thinking (CNBT) at Arkansas State University, The Joint Translational Research Lab of Arkansas State University, St. Bernards Medical Center, Jonesboro, AR, 72467, USA. xhuang@astate.edu.
Arkansas State University · USAnn Arbor Center for Independent Living · USUniversity of Arkansas at Pine Bluff · USUniversity of Pennsylvania · US

Funding

Understanding Hesitant AdoptersP20GM103429 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI Lawrence E Cornett, JERRY WARE · 2012 to 2026
$60.9M
Resources for development and validation of Radiomic analyses & Adaptive TherapyU01CA187013 · NCI · WASHINGTON UNIVERSITY · PI PRIOR, FRED WILLIAM, SHARMA, ASHISH · 2014 to 2018
$2.6M
Biomedical Computing and Informatics Strategies for Precision MedicineR01LM012601 · NLM · UNIVERSITY OF PENNSYLVANIA · PI HUANG, XIUZHEN, MOORE, JASON H. · 2017 to 2020
$1.8M
NCI NIH HHS U01 CA187013NIGMS NIH HHS P20 GM103429NLM NIH HHS R01 LM012601
6 · The paper itself

Abstract

One of the challenges with urgent evaluation of patients with acute respiratory distress syndrome (ARDS) in the emergency room (ER) is distinguishing between cardiac vs infectious etiologies for their pulmonary findings. We conducted a retrospective study with the collected data of 171 ER patients. ER patient classification for cardiac and infection causes was evaluated with clinical data and chest X-ray image data. We show that a deep-learning model trained with an external image data set can be used to extract image features and improve the classification accuracy of a data set that does not contain enough image data to train a deep-learning model. An analysis of clinical feature importance was performed to identify the most important clinical features for ER patient classification. The current model is publicly available with an interface at the web link: http://nbttranslationalresearch.org/ .

Indexed as

Deep LearningEmergency Service, HospitalRadiography, ThoracicDiseaseHumansPatientsRespiratory Distress SyndromeRetrospective Studies

Identifiers

PMID33262425
PMCPMC7708466
OpenAlexW3108080245

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.