Evidence map›Paper›PMID 33261720›Full record

ArticleEmerging infectious diseases2021

Fatal Case of Chronic Jamestown Canyon Virus Encephalitis Diagnosed by Metagenomic Sequencing in Patient Receiving Rituximab.

Isaac H Solomon, Vijay S Ganesh, Guixia Yu, Xian Ding Deng, Michael R Wilson, Steve Miller, Tracey A Milligan, Shibani S Mukerji, Abigail Mathewson, Justin Linxweiler and 8 more

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Emerging infectious diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Transfusion-Transmitted Cache Valley Virus Infection in a Kidney Transplant Recipient With Meningoencephalitis.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2023
    Article
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  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 1 country.

Isaac H Solomon
Vijay S Ganesh
Guixia Yu
Xian Ding Deng
Michael R Wilson
Steve Miller
Tracey A Milligan
Shibani S Mukerji
Abigail Mathewson
Justin Linxweiler
Darlene Morse
Jana M Ritter
J Erin Staples
Holly Hughes
Carolyn V Gould
Pardis C Sabeti
Charles Y Chiu
Anne Piantadosi
Emory University · USHarvard University · USUniversity of California, San Francisco · USBrigham and Women's Hospital · USHoward Hughes Medical Institute · USMassachusetts General Hospital · USBroad Institute · USHarvard University Press · US

Funding

Viral Genomics: evolution, spread, and host interactionsU19AI110818 · NIAID · BROAD INSTITUTE, INC. · PI SABETI, PARDIS CHRISTINE · 2014 to 2024
$66.5M
INFECTIOUS DISEASE AND BASIC MICROBIOLOGICAL MECHANISMST32AI007061 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI Marcia B Goldberg · 1985 to 2026
$12.1M
Harvard Clinical and Translational Science CenterKL2TR001100 · NCATS · HARVARD MEDICAL SCHOOL · PI NADLER, LEE MARSHALL · 2013 to 2017
$8.5M
Next-Generation Diagnostics for Acute EncephalitisK08NS096117 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WILSON, MICHAEL R · 2017 to 2021
$999k
Identification of diagnostic and prognostic host biomarkers of Zika virus infection by transcriptome profilingR21AI129455 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHIU, CHARLES YEN · 2017 to 2018
$436k
NCATS NIH HHS KL2 TR001100NIAID NIH HHS R21 AI129455NIAID NIH HHS T32 AI007061NIAID NIH HHS U19 AI110818NINDS NIH HHS K08 NS096117
6 · The paper itself

Abstract

A 56-year-old man receiving rituximab who had months of neurologic symptoms was found to have Jamestown Canyon virus in cerebrospinal fluid by clinical metagenomic sequencing. The patient died, and postmortem examination revealed extensive neuropathologic abnormalities. Deep sequencing enabled detailed characterization of viral genomes from the cerebrospinal fluid, cerebellum, and cerebral cortex.

Indexed as

Encephalitis, CaliforniaEncephalitis Virus, CaliforniaAntibodies, ViralHumansMaleMetagenomeMetagenomicsMiddle AgedRituximabAntibodies, ViralRituximabarbovirusencephalitisJamestown Canyon virusmetagenomic next-generation sequencingmonoclonal antibodyorthobunyavirusrituximabvector-borne infectionsviruses

Identifiers

PMID33261720
PMCPMC7774567
OpenAlexW3106619470

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.