Evidence map›Paper›PMID 33260138›Full record

ArticleJournal of neurosurgery. Pediatrics2021

Artificial intelligence for automatic cerebral ventricle segmentation and volume calculation: a clinical tool for the evaluation of pediatric hydrocephalus.

Jennifer L Quon, Michelle Han, Lily H Kim, Mary Ellen Koran, Leo C Chen, Edward H Lee, Jason Wright, Vijay Ramaswamy, Robert M Lober, Michael D Taylor and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of neurosurgery. Pediatrics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

Jennifer L Quon1Department of Neurosurgery, Stanford University School of Medicine.
Michelle Han2Stanford University School of Medicine.
Lily H Kim2Stanford University School of Medicine.
Mary Ellen Koran3Department of Radiology, Stanford University School of Medicine.
Leo C Chen4Department of Urology, Stanford University School of Medicine.
Edward H Lee5Department of Electrical Engineering, Stanford University School of Engineering, Stanford, California.
Jason Wright6Department of Radiology, Seattle Children's Hospital, University of Washington School of Medicine, Seattle, Washington.
Vijay Ramaswamy7Section of Neuro-Oncology, The Hospital for Sick Children, University of Toronto, Ontario, Canada.
Robert M Lober8Department of Neurosurgery, Dayton Children's Hospital, Wright State University Boonshoft School of Medicine, Dayton, Ohio.
Michael D Taylor9Division of Neurosurgery, The Hospital for Sick Children, University of Toronto, Ontario, Canada.
Gerald A Grant1Department of Neurosurgery, Stanford University School of Medicine.
Samuel H Cheshier10Department of Neurosurgery, University of Utah School of Medicine, Salt Lake City, Utah; and.
John R W Kestle10Department of Neurosurgery, University of Utah School of Medicine, Salt Lake City, Utah; and.
Michael S B Edwards1Department of Neurosurgery, Stanford University School of Medicine.
Kristen W Yeom3Department of Radiology, Stanford University School of Medicine.
Stanford University · USUniversity of Utah · USHospital for Sick Children · CASeattle Children's Hospital · USUniversity of Toronto · CAWright State University · US

Funding

Stanford Neurosurgery Resident Research Education ProgramR25NS065741 · NINDS · STANFORD UNIVERSITY · PI HAYDEN GEPHART, MELANIE, PORTER, BRENDA ELAINE · 2009 to 2022
$2.0M
NINDS NIH HHS R25 NS065741
6 · The paper itself

Abstract

objectiveImaging evaluation of the cerebral ventricles is important for clinical decision-making in pediatric hydrocephalus. Although quantitative measurements of ventricular size, over time, can facilitate objective comparison, automated tools for calculating ventricular volume are not structured for clinical use. The authors aimed to develop a fully automated deep learning (DL) model for pediatric cerebral ventricle segmentation and volume calculation for widespread clinical implementation across multiple hospitals.

methodsThe study cohort consisted of 200 children with obstructive hydrocephalus from four pediatric hospitals, along with 199 controls. Manual ventricle segmentation and volume calculation values served as "ground truth" data. An encoder-decoder convolutional neural network architecture, in which T2-weighted MR images were used as input, automatically delineated the ventricles and output volumetric measurements. On a held-out test set, segmentation accuracy was assessed using the Dice similarity coefficient (0 to 1) and volume calculation was assessed using linear regression. Model generalizability was evaluated on an external MRI data set from a fifth hospital. The DL model performance was compared against FreeSurfer research segmentation software.

resultsModel segmentation performed with an overall Dice score of 0.901 (0.946 in hydrocephalus, 0.856 in controls). The model generalized to external MR images from a fifth pediatric hospital with a Dice score of 0.926. The model was more accurate than FreeSurfer, with faster operating times (1.48 seconds per scan).

conclusionsThe authors present a DL model for automatic ventricle segmentation and volume calculation that is more accurate and rapid than currently available methods. With near-immediate volumetric output and reliable performance across institutional scanner types, this model can be adapted to the real-time clinical evaluation of hydrocephalus and improve clinician workflow.

Indexed as

Artificial IntelligenceAdolescentCerebral VentriclesChildChild, PreschoolCohort StudiesDeep LearningFemaleHumansHydrocephalusImage Processing, Computer-AssistedInfantInfant, NewbornMagnetic Resonance ImagingMaleModels, Theoreticalartificial intelligencecerebral ventriclesdeep learninghydrocephalusmachine learningventricular volume

Identifiers

PMID33260138
PMCPMC9707365
OpenAlexW3109556460

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.