Evidence map›Paper›PMID 33258197›Full record

ArticleNMR in biomedicine2021

Retrospective respiratory motion correction in cardiac cine MRI reconstruction using adversarial autoencoder and unsupervised learning.

Vahid Ghodrati, Mark Bydder, Fadil Ali, Chang Gao, Ashley Prosper, Kim-Lien Nguyen, Peng Hu

Open access · greenAbstract read
In one paragraph

Article in NMR in biomedicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  4. Review
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  8. Review
  9. Article
  10. Cardiac MR: From Theory to Practice.Frontiers in cardiovascular medicine · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Vahid GhodratiDepartment of Radiological Sciences, David Geffen School of Medicine, University of California, Los Angeles, California, USA.ORCID 0000-0002-5964-333X
Mark BydderDepartment of Radiological Sciences, David Geffen School of Medicine, University of California, Los Angeles, California, USA.ORCID 0000-0001-9210-0225
Fadil AliDepartment of Radiological Sciences, David Geffen School of Medicine, University of California, Los Angeles, California, USA.
Chang GaoDepartment of Radiological Sciences, David Geffen School of Medicine, University of California, Los Angeles, California, USA.
Ashley ProsperDepartment of Radiological Sciences, David Geffen School of Medicine, University of California, Los Angeles, California, USA.ORCID 0000-0001-8615-5246
Kim-Lien NguyenDepartment of Radiological Sciences, David Geffen School of Medicine, University of California, Los Angeles, California, USA.ORCID 0000-0002-8854-2976
Peng HuDepartment of Radiological Sciences, David Geffen School of Medicine, University of California, Los Angeles, California, USA.
University of California, Los Angeles · US

Funding

Expanding on a new paradigm for MRI in pediatric congenital heart diseaseR01HL127153 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CHRISTODOULOU, ANTHONY G, FINN, JOHN PAUL · 2015 to 2024
$6.1M
Ferumoxytol-Enhanced Cardiac MRI for Ischemic Heart DiseaseR01HL148182 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI NGUYEN, KIM-LIEN T · 2020 to 2024
$3.8M
Tailoring Stress Cardiac MRI for Women with Ischemic Heart DiseaseI01CX001901 · VA · VA GREATER LOS ANGELES HEALTHCARE SYSTEM · PI NGUYEN, KIM-LIEN T · 2019 to 2025
–
CSRD VA I01 CX001901NHLBI NIH HHS R01 HL127153NHLBI NIH HHS R01 HL148182
6 · The paper itself

Abstract

The aim of this study was to develop a deep neural network for respiratory motion compensation in free-breathing cine MRI and evaluate its performance. An adversarial autoencoder network was trained using unpaired training data from healthy volunteers and patients who underwent clinically indicated cardiac MRI examinations. A U-net structure was used for the encoder and decoder parts of the network and the code space was regularized by an adversarial objective. The autoencoder learns the identity map for the free-breathing motion-corrupted images and preserves the structural content of the images, while the discriminator, which interacts with the output of the encoder, forces the encoder to remove motion artifacts. The network was first evaluated based on data that were artificially corrupted with simulated rigid motion with regard to motion-correction accuracy and the presence of any artificially created structures. Subsequently, to demonstrate the feasibility of the proposed approach in vivo, our network was trained on respiratory motion-corrupted images in an unpaired manner and was tested on volunteer and patient data. In the simulation study, mean structural similarity index scores for the synthesized motion-corrupted images and motion-corrected images were 0.76 and 0.93 (out of 1), respectively. The proposed method increased the Tenengrad focus measure of the motion-corrupted images by 12% in the simulation study and by 7% in the in vivo study. The average overall subjective image quality scores for the motion-corrupted images, motion-corrected images and breath-held images were 2.5, 3.5 and 4.1 (out of 5.0), respectively. Nonparametric-paired comparisons showed that there was significant difference between the image quality scores of the motion-corrupted and breath-held images (P < .05); however, after correction there was no significant difference between the image quality scores of the motion-corrected and breath-held images. This feasibility study demonstrates the potential of an adversarial autoencoder network for correcting respiratory motion-related image artifacts without requiring paired data.

Indexed as

ArtifactsNeural Networks, ComputerRespirationUnsupervised Machine LearningBreath HoldingComputer SimulationHeartHumansImage Processing, Computer-AssistedMagnetic Resonance Imaging, CineMotionStatistics, Nonparametricadversarial autoencoder, cardiovascular magnetic resonance, deep learning, magnetic resonance imaging, respiratory motion correction

Identifiers

PMID33258197
PMCPMC10193526
OpenAlexW3109460038

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.