Evidence map›Paper›PMID 33257658›Full record

ArticleNature communications2020

Identification of regulators of poly-ADP-ribose polymerase inhibitor response through complementary CRISPR knockout and activation screens.

Kristen E Clements, Emily M Schleicher, Tanay Thakar, Anastasia Hale, Ashna Dhoonmoon, Nathanial J Tolman, Anchal Sharma, Xinwen Liang, Yuka Imamura Kawasawa, Claudia M Nicolae and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Kristen E ClementsDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.
Emily M SchleicherDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.
Tanay ThakarDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.ORCID 0000-0001-5261-458X
Anastasia HaleDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.ORCID 0000-0002-7955-7316
Ashna DhoonmoonDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.
Nathanial J TolmanDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.
Anchal SharmaRutgers Cancer Institute of New Jersey, Rutgers the State University of New Jersey, New Brunswick, NJ, 08901, USA.
Xinwen LiangDepartment of Pediatrics, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.
Yuka Imamura KawasawaDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.
Claudia M NicolaeDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.ORCID 0000-0003-4933-5496
Hong-Gang WangDepartment of Pediatrics, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.
Subhajyoti DeRutgers Cancer Institute of New Jersey, Rutgers the State University of New Jersey, New Brunswick, NJ, 08901, USA.ORCID 0000-0002-2313-8593
George-Lucian MoldovanDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA. glm29@psu.edu.ORCID 0000-0003-3825-149X
Pennsylvania State University · USRutgers, The State University of New Jersey · US

Funding

The Role of Mono-ADP-Ribosylation by PARP14 in RadioresistanceR01ES026184 · NIEHS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI George Lucian Moldovan · 2016 to 2026
$3.6M
The role of DNA damage tolerance pathways in human cellsR01GM134681 · NIGMS · UNIVERSITY OF VIRGINIA · PI George Lucian Moldovan, Claudia M Nicolae · 2019 to 2026
$3.0M
Non-canonical Caspase-8 Activation on Autophagosomal MembranesR01CA222349 · NCI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI HONG-GANG WANG · 2018 to 2026
$3.0M
Computational approaches for identifying epigenomic contexts of somatic mutationsR01GM129066 · NIGMS · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI DE, SUBHAJYOTI · 2019 to 2023
$1.7M
Novel roles of PARP10-mediated Genomic Stability and Cellular TransformationF31CA243301 · NCI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI SCHLEICHER, EMILY · 2019 to 2021
$90k
NCI NIH HHS F31 CA243301NCI NIH HHS R01 CA222349NIEHS NIH HHS R01 ES026184NIGMS NIH HHS R01 GM129066NIGMS NIH HHS R01 GM134681
6 · The paper itself

Abstract

Inhibitors of poly-ADP-ribose polymerase 1 (PARPi) are highly effective in killing cells deficient in homologous recombination (HR); thus, PARPi have been clinically utilized to successfully treat BRCA2-mutant tumors. However, positive response to PARPi is not universal, even among patients with HR-deficiency. Here, we present the results of genome-wide CRISPR knockout and activation screens which reveal genetic determinants of PARPi response in wildtype or BRCA2-knockout cells. Strikingly, we report that depletion of the ubiquitin ligase HUWE1, or the histone acetyltransferase KAT5, top hits from our screens, robustly reverses the PARPi sensitivity caused by BRCA2-deficiency. We identify distinct mechanisms of resistance, in which HUWE1 loss increases RAD51 levels to partially restore HR, whereas KAT5 depletion rewires double strand break repair by promoting 53BP1 binding to double-strand breaks. Our work provides a comprehensive set of putative biomarkers that advance understanding of PARPi response, and identifies novel pathways of PARPi resistance in BRCA2-deficient cells.

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsBiomarkersBRCA2 ProteinDNA DamageDNA RepairGene Knockout TechniquesHeLa CellsHomologous RecombinationHumansLysine Acetyltransferase 5Mad2 ProteinsPoly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) PolymerasesRad51 RecombinaseTumor Suppressor p53-Binding Protein 1Tumor Suppressor ProteinsBiomarkersBRCA2 ProteinBRCA2 protein, humanHUWE1 protein, humanKAT5 protein, humanLysine Acetyltransferase 5MAD2L2 protein, humanMad2 ProteinsPoly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) PolymerasesRAD51 protein, humanRad51 RecombinaseTP53BP1 protein, humanTumor Suppressor p53-Binding Protein 1Tumor Suppressor ProteinsUbiquitin-Protein Ligases

Identifiers

PMID33257658
PMCPMC7704667
OpenAlexW3108367665

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.