Evidence map›Paper›PMID 33255923›Full record

ArticleBiomedicines2020

Whole-Transcriptome Analysis in Peripheral Blood Mononuclear Cells from Patients with Lipid-Specific Oligoclonal IgM Band Characterization Reveals Two Circular RNAs and Two Linear RNAs as Biomarkers of Highly Active Disease.

Leire Iparraguirre, Danel Olaverri, Telmo Blasco, Lucía Sepúlveda, Tamara Castillo-Triviño, Mercedes Espiño, Lucienne Costa-Frossard, Álvaro Prada, Luisa María Villar, David Otaegui and 1 more

Open access · goldAbstract read
In one paragraph

Article in Biomedicines, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Leire IparraguirreBiodonostia Health Research Institute, Neurosciences Area, Multiple Sclerosis Group, Doctor Begiristain, s/n, 20014 San Sebastian, Spain.ORCID 0000-0001-6730-770X
Danel OlaverriBiodonostia Health Research Institute, Neurosciences Area, Multiple Sclerosis Group, Doctor Begiristain, s/n, 20014 San Sebastian, Spain.
Telmo BlascoBiodonostia Health Research Institute, Neurosciences Area, Multiple Sclerosis Group, Doctor Begiristain, s/n, 20014 San Sebastian, Spain.
Lucía SepúlvedaBiodonostia Health Research Institute, Neurosciences Area, Multiple Sclerosis Group, Doctor Begiristain, s/n, 20014 San Sebastian, Spain.
Tamara Castillo-TriviñoBiodonostia Health Research Institute, Neurosciences Area, Multiple Sclerosis Group, Basque Health Service, Neurology Department, Doctor Begiristain, s/n, 20014 San Sebastian, Spain.
Mercedes EspiñoDepartments of Immunology and Neurology, Multiple Sclerosis Unit, Hospital Ramon y Cajal, (IRYCIS), 28034 Madrid, Spain.
Lucienne Costa-FrossardDepartments of Immunology and Neurology, Multiple Sclerosis Unit, Hospital Ramon y Cajal, (IRYCIS), 28034 Madrid, Spain.
Álvaro PradaBiodonostia Health Research Institute, Neurosciences Area, Multiple Sclerosis Group, Basque Health Service, Immunology Department, Doctor Begiristain, s/n, 20014 San Sebastian, Spain.
Luisa María VillarSpanish Network of Multiple Sclerosis, 08028 Barcelona, Spain.
David OtaeguiBiodonostia Health Research Institute, Neurosciences Area, Multiple Sclerosis Group, Doctor Begiristain, s/n, 20014 San Sebastian, Spain.ORCID 0000-0002-6625-5976
Maider Muñoz-CullaBiodonostia Health Research Institute, Neurosciences Area, Multiple Sclerosis Group, Doctor Begiristain, s/n, 20014 San Sebastian, Spain.
Biogipuzkoa Health Research Institute · ESSpanish Multiple Sclerosis Network · ESInstituto Ramón y Cajal de Investigación Sanitaria · ES

Funding

Basque Government ELKARTEK programBasque Government PRE_2019_2_0206Diputación Foral de Gipuzkoa 109/18Instituto de Salud Carlos III PI15/00513Instituto de Salud Carlos III PI17/00189Red Española de Esclerosis Múltiple (REEM) RD16/0015/0001Red Española de Esclerosis Múltiple (REEM) RD16/0015/0007
6 · The paper itself

Abstract

The presence of anti-myelin lipid-specific oligoclonal IgM bands (LS-OCMBs) has been defined as an accurate predictor of an aggressive evolution of multiple sclerosis. However, the detection of this biomarker is performed in cerebrospinal fluid, a quite invasive liquid biopsy. In the present study we aimed at studying the expression profile of miRNA, snoRNA, circRNA and linearRNA in peripheral blood mononuclear cells (PBMCs) from patients with lipid-specific oligoclonal IgM band characterization. We included a total of 89 MS patients, 47 with negative LS-OCMB status and 42 with positive status. Microarray (miRNA and snoRNA) and RNA-seq (circular and linear RNAs) were used to perform the profiling study in the discovery cohort and candidates were validated by RT-qPCR in the whole cohort. The biomarker potential of the candidates was evaluated by ROC curve analysis. RNA-seq and RT-qPCR validation revealed that two circular (hsa_circ_0000478 and hsa_circ_0116639) and two linear RNAs (

Indexed as

biomarkerscircular RNAsmicroRNAsmultiple sclerosisoligoclonal bandstranscriptome

Identifiers

PMID33255923
PMCPMC7759842
OpenAlexW3108263778

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.