Evidence map›Paper›PMID 33255340›Full record

ArticleInternational journal of molecular sciences2020

Effective RNA Knockdown Using CRISPR-Cas13a and Molecular Targeting of the

Saifullah, Matomo Sakari, Takeshi Suzuki, Seiji Yano, Toshifumi Tsukahara

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
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  6. Review
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  8. Nucleic Acid-Based Approaches to Tackle KRAS Mutant Cancers.International journal of molecular sciences · 2023
    Review
  9. CRISPR applications in cancer diagnosis and treatment.Cellular & molecular biology letters · 2023
    Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Cas13d: A New Molecular Scissor for Transcriptome Engineering.Frontiers in cell and developmental biology · 2022
    Review
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

SaifullahArea of Bioscience and Biotechnology, School of Materials Science, Japan Advanced Institute of Science and Technology (JAIST), 1-1 Asahidai, Nomi City, Ishikawa 923-1292, Japan.ORCID 0000-0002-5880-1914
Matomo SakariArea of Bioscience and Biotechnology, School of Materials Science, Japan Advanced Institute of Science and Technology (JAIST), 1-1 Asahidai, Nomi City, Ishikawa 923-1292, Japan.
Takeshi SuzukiDivision of Functional Genomics, Cancer Research Institute, Kanazawa University, Kakuma-Machi, Kanazawa 920-1192, Japan.
Seiji YanoDivision of Medical Oncology, Cancer Research Institute, Kanazawa University, 13-1 Takara-Machi, Kanazawa 920-0934, Japan.
Toshifumi TsukaharaArea of Bioscience and Biotechnology, School of Materials Science, Japan Advanced Institute of Science and Technology (JAIST), 1-1 Asahidai, Nomi City, Ishikawa 923-1292, Japan.ORCID 0000-0002-1842-5790

Funding

Japan Society for the Promotion of Science 17H02204 and 18K19288
6 · The paper itself

Abstract

RNAi technology has significant potential as a future therapeutic and could theoretically be used to knock down disease-specific RNAs. However, due to frequent off-target effects, low efficiency, and limited accessibility of nuclear transcripts, the clinical application of the technology remains challenging. In this study, we first assessed the stability of Cas13a mRNA and guide RNA. Next, we titrated Cas13a and guide RNA vectors to achieve effective knockdown of firefly luciferase (FLuc) RNA, used as a target transcript. The interference specificity of Cas13a on guide RNA design was next explored. Subsequently, we targeted the

Indexed as

Molecular Targeted TherapyCaspasesCell Line, TumorCell ProliferationCell SurvivalCRISPR-Cas SystemsGene Knockdown TechniquesHumansLung NeoplasmsOncogene Proteins, FusionRNARNA Interferencecaspase 13CaspasesEML4-ALK fusion protein, humanOncogene Proteins, FusionRNAcell viabilityCRISPR-Cas13aEML4-ALKfirefly luciferaseRNA knockdownRNA stability

Identifiers

PMID33255340
PMCPMC7727695

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.