ArticlePloS one2020
Development of a minimal KASP marker panel for distinguishing genotypes in apple collections.
Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed.
- SNPoptimizer: a scalable genetic-algorithm framework to derive minimal discriminatory SNP panels from large genotyping datasets.Molecular breeding : new strategies in plant improvement · 2026Article
- Molecular Labelling Tool for Cereal Genetic Resources Management Derived from Barley and Tetraploid Wheat Genebank-Genomics Projects.Plants (Basel, Switzerland) · 2026Article
- Allelic Diversity and Development of Breeder-Friendly Marker Specific to floury2 Gene Regulating the Accumulation of α-Zeins and Essential Amino Acids in Maize Kernel.Biochemical genetics · 2025Article
- Population genomics uncovers loci for trait improvement in the indigenous African cereal tef (Eragrostis tef).Communications biology · 2025Article
- Wind Pollination of Apple Flowers Under Insect Exclusion Nets Questions the Insect-Dependent Pollination Model of Modern Apple Plantations.Plants (Basel, Switzerland) · 2025Article
- Development of a KASP marker set for high-throughput genotyping in Japanese barley breeding programs with various end-use purposes.Breeding science · 2025Article
- Genome-wide association analysis and KASP markers development for protein quality traits in winter wheat.BMC plant biology · 2025Article
- Development of a robust SNP marker set for genotyping diverse gene bank collections of polyploid roses.BMC plant biology · 2024Article
- Development of KASP markers, SNP fingerprinting and population genetic analysis ofFrontiers in plant science · 2024Article
- Evaluation of genetic diversity among olive trees (Frontiers in plant science · 2024Article
- One hundred single-copy nuclear sequence markers for olive variety identification: a case of fingerprinting database construction in China.Molecular breeding : new strategies in plant improvement · 2023Article
- Article
- Development and validation of diagnostic SNP markers for quality control genotyping in a collection of four rice (Oryza) species.Scientific reports · 2021Article
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Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Accurate identification of named accessions in germplasm collections is extremely important, especially for vegetatively propagated crops which are expensive to maintain. Thus, an inexpensive, reliable, and rapid genotyping method is essential because it avoids the need for laborious and time-consuming morphological comparisons. Single Nucleotide Polymorphism (SNP) marker panels containing large numbers of SNPs have been developed for many crop species, but such panels are much too large for basic cultivar identification. Here, we have identified a minimum set of SNP markers sufficient to distinguish apple cultivars held in the English and Welsh national collections providing a cheaper and automatable alternative to the markers currently used by the community. We show that SNP genotyping with a small set of well selected markers is equally efficient as microsatellites for the identification of apple cultivars and has the added advantage of automation and reduced cost when screening large numbers of samples.
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