Evidence map›Paper›PMID 33252155›Full record

ArticleHuman mutation2021

New variants and in silico analyses in GRK1 associated Oguchi disease.

James A Poulter, Molly S C Gravett, Rachel L Taylor, Kaoru Fujinami, Julie De Zaeytijd, James Bellingham, Atta Ur Rehman, Takaaki Hayashi, Mineo Kondo, Abdur Rehman and 19 more

Open access · hybridAbstract read
In one paragraph

Article in Human mutation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Identification of novel mutations in theInternational journal of ophthalmology · 2026
    Article
  4. Review
  5. Review
  6. Genetic variants of accessory proteins and G proteins in human genetic disease.Critical reviews in clinical laboratory sciences · 2025
    Review
  7. DominantFrontiers in cell and developmental biology · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 16 institutions in 7 countries.

James A PoulterDivision of Molecular Medicine, Leeds Institute of Medical Research, University of Leeds, Leeds, UK.ORCID 0000-0003-2048-5693
Molly S C GravettSchool of Molecular and Cellular Biology, University of Leeds, Leeds, UK.
Rachel L TaylorDivision of Evolution and Genomic Sciences, School of Biological Sciences, Faculty of Biology, Medicines and Health, University of Manchester, Manchester, UK.
Kaoru FujinamiNational Institute of Sensory Organs, National Hospital Organization Tokyo Medical Centre, Tokyo, Japan.ORCID 0000-0003-4248-0033
Julie De ZaeytijdGhent University, Ghent, Belgium.
James BellinghamUCL Institute of Ophthalmology, London, UK.
Atta Ur RehmanDivision of Genetic Medicine, Centre Hospitalier Universitaire Vaudois (CHUV), University of Lausanne, Lausanne, Switzerland.
Takaaki HayashiThe Jikei University School of Medicine, Tokyo, Japan.
Mineo KondoMie University Graduate School of Medicine, Mie, Japan.
Abdur RehmanDepartment of Genetics, Faculty of Science, Hazara University Mansehra, Dhodial, Pakistan.
Muhammad AnsarClinical Research Center, Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel, Switzerland.
Dan DonnellySchool of Biomedical Sciences, University of Leeds, Leeds, UK.
Carmel ToomesDivision of Molecular Medicine, Leeds Institute of Medical Research, University of Leeds, Leeds, UK.
Manir AliDivision of Molecular Medicine, Leeds Institute of Medical Research, University of Leeds, Leeds, UK.
UK Inherited Retinal Disease Consortium, Genomics England Research Consortium
Elfride De BaereGhent University, Ghent, Belgium.
Bart P LeroyGhent University, Ghent, Belgium.
Nigel P DaviesSt Thomas's Hospital, London, UK.
Robert H HendersonDepartment of Ophthalmology, Great Ormond Street Hospital, London, UK.
Andrew R WebsterMoorfields Eye Hospital, London, UK.
Carlo RivoltaDepartment of Genetics and Genome Biology, University of Leicester, Leicester, UK.ORCID 0000-0002-0733-9950
Christina ZeitzSorbonne Université, INSERM, CNRS, Institut de la Vision, Paris, France.
Omar A MahrooMoorfields Eye Hospital, London, UK.
Gavin ArnoNational Institute of Sensory Organs, National Hospital Organization Tokyo Medical Centre, Tokyo, Japan.
Graeme C M BlackDivision of Evolution and Genomic Sciences, School of Biological Sciences, Faculty of Biology, Medicines and Health, University of Manchester, Manchester, UK.
Martin McKibbinDivision of Molecular Medicine, Leeds Institute of Medical Research, University of Leeds, Leeds, UK.
Sarah A HarrisSchool of Physics and Astronomy, University of Leeds, Leeds, UK.
Kamron N KhanDivision of Molecular Medicine, Leeds Institute of Medical Research, University of Leeds, Leeds, UK.
Chris F InglehearnDivision of Molecular Medicine, Leeds Institute of Medical Research, University of Leeds, Leeds, UK.
University of Leeds · GBGhent University Hospital · BEHazara University · PKMoorfields Eye Hospital · GBUniversity of Manchester · GBCentre National de la Recherche Scientifique · FRChildren's Hospital of Philadelphia · USGreat Ormond Street Hospital · GBInstitute of Molecular and Clinical Ophthalmology Basel · CHJikei University School of Medicine · JPKeio University · JPMie University · JPSt Thomas' Hospital · GBTokyo Medical Center · JPUniversity College London · GBUniversity of Leicester · GB

Funding

Department of HealthMedical Research Council MC_EX_MR/M009203/1Medical Research Council MC_PC_14089Medical Research Council MR/M009203/1Medical Research Council MR/R024952/1Wellcome Trust 205041/Z/16/ZWellcome Trust 206619/Z/17/Z
6 · The paper itself

Abstract

Biallelic mutations in G-Protein coupled receptor kinase 1 (GRK1) cause Oguchi disease, a rare subtype of congenital stationary night blindness (CSNB). The purpose of this study was to identify disease causing GRK1 variants and use in-depth bioinformatic analyses to evaluate how their impact on protein structure could lead to pathogenicity. Patients' genomic DNA was sequenced by whole genome, whole exome or focused exome sequencing. Disease associated variants, published and novel, were compared to nondisease associated missense variants. The impact of GRK1 missense variants at the protein level were then predicted using a series of computational tools. We identified twelve previously unpublished cases with biallelic disease associated GRK1 variants, including eight novel variants, and reviewed all GRK1 disease associated variants. Further structure-based scoring revealed a hotspot for missense variants in the kinase domain. In addition, to aid future clinical interpretation, we identified the bioinformatics tools best able to differentiate disease associated from nondisease associated variants. We identified GRK1 variants in Oguchi disease patients and investigated how disease-causing variants may impede protein function in-silico.

Indexed as

Eye Diseases, HereditaryG-Protein-Coupled Receptor Kinase 1Night BlindnessHumansG-Protein-Coupled Receptor Kinase 1GRK1 protein, humanCSNBGRK1Oguchi diseaserhodopsin

Identifiers

PMID33252155
PMCPMC7898643
OpenAlexW3108317633

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.