Evidence map›Paper›PMID 33248470›Full record

ArticleCell2020

Case Study: Prolonged Infectious SARS-CoV-2 Shedding from an Asymptomatic Immunocompromised Individual with Cancer.

Victoria A Avanzato, M Jeremiah Matson, Stephanie N Seifert, Rhys Pryce, Brandi N Williamson, Sarah L Anzick, Kent Barbian, Seth D Judson, Elizabeth R Fischer, Craig Martens and 4 more

Registry-linked trialOpen access · bronzeAbstract readCase Reports
In one paragraph

Article in Cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05172063 (Persistent SARS-CoV-2 Infection in Children With Cancer and Impaired Immune Responsiveness), which is not on this map. Cited by 483 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
483citing papers in PubMed, 4 pooled it
17.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05172063 unknown statusnot on this mapstarted 2022, after this paper: background citation

Persistent SARS-CoV-2 Infection in Children With Cancer and Impaired Immune Responsiveness

TypeobservationalSponsorChildren's Cancer Hospital Egypt 57357Ran2022 to 2023Enrolled30ConditionsChildren With Cancer, SARS-CoV-2 Infection
3 · Its place in the literature

Who cites it

483 citing papers in PubMed, 4 syntheses or guidelines pooled it, 794 citations in OpenAlex.

  1. Guideline
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Trial
  6. Repeat subcutaneous administration of casirivimab and imdevimab in adults is well-tolerated and prevents the occurrence of COVID-19.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2022
    Trial
  7. Article
  8. Viral syncytia evolve to resist interferon.Nature communications · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Molecular Identification of Culturable Bacteria andInternational journal of microbiology · 2026
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

423 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Victoria A AvanzatoLaboratory of Virology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA; Division of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK.
M Jeremiah MatsonLaboratory of Virology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA; Marshall University Joan C. Edwards School of Medicine, Huntington, WV 25701, USA.
Stephanie N SeifertLaboratory of Virology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA.
Rhys PryceDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK.
Brandi N WilliamsonLaboratory of Virology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA.
Sarah L AnzickResearch Technologies Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA.
Kent BarbianResearch Technologies Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA.
Seth D JudsonDepartment of Medicine, University of Washington, Seattle, WA 98195, USA.
Elizabeth R FischerResearch Technologies Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA.
Craig MartensResearch Technologies Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA.
Thomas A BowdenDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK.
Emmie de WitLaboratory of Virology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA.
Francis X RiedoEvergreenHealth, Kirkland, WA 98034, USA. Electronic address: fxriedo@evergreenhealthcare.org.
Vincent J MunsterLaboratory of Virology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840, USA. Electronic address: vincent.munster@nih.gov.
National Institutes of Health · USNational Institute of Allergy and Infectious Diseases · USUniversity of Oxford · GBEvergreenHealth · USUniversity of Washington · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008169 · NIGMS · EMORY UNIVERSITY · PI GROSS, ROBERT E · 1987 to 2021
$20.3M
Medical Research Council MR/S007555/1NIGMS NIH HHS T32 GM008169
6 · The paper itself

Abstract

Long-term severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) shedding was observed from the upper respiratory tract of a female immunocompromised individual with chronic lymphocytic leukemia and acquired hypogammaglobulinemia. Shedding of infectious SARS-CoV-2 was observed up to 70 days, and of genomic and subgenomic RNA up to 105 days, after initial diagnosis. The infection was not cleared after the first treatment with convalescent plasma, suggesting a limited effect on SARS-CoV-2 in the upper respiratory tract of this individual. Several weeks after a second convalescent plasma transfusion, SARS-CoV-2 RNA was no longer detected. We observed marked within-host genomic evolution of SARS-CoV-2 with continuous turnover of dominant viral variants. However, replication kinetics in Vero E6 cells and primary human alveolar epithelial tissues were not affected. Our data indicate that certain immunocompromised individuals may shed infectious virus longer than previously recognized. Detection of subgenomic RNA is recommended in persistently SARS-CoV-2-positive individuals as a proxy for shedding of infectious virus.

Indexed as

AgedAntibodies, ViralCommon Variable ImmunodeficiencyCOVID-19FemaleHumansLeukemia, Lymphocytic, Chronic, B-CellRespiratory Tract InfectionsSARS-CoV-2Antibodies, Viralasymptometicchronic lymphocytic leukemiaconvalescent plasmaCOVID-19immunocompromisedinfectious viruslong-term sheddingSARS-CoV-2within host evolution

Identifiers

PMID33248470
PMCPMC7640888
OpenAlexW3094870207

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.