Evidence map›Paper›PMID 33247976›Full record

ArticleMolecular microbiology2021

RecA-independent recombination: Dependence on the Escherichia coli RarA protein.

Kanika Jain, Elizabeth A Wood, Zachary J Romero, Michael M Cox

Open access · greenAbstract read
In one paragraph

Article in Molecular microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 24 citations in OpenAlex.

  1. Journal of microbiology & biology education · 2026
    Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Generation and Repair of Postreplication Gaps in Escherichia coli.Microbiology and molecular biology reviews : MMBR · 2023
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Recombinase-free cloning (RFC) protocol for gene swapping.Molecular biology research communications · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Molecular insights into the prototypical single-stranded DNA-binding protein fromCritical reviews in biochemistry and molecular biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kanika JainDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI, USA.
Elizabeth A WoodDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI, USA.
Zachary J RomeroDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI, USA.
Michael M CoxDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI, USA.ORCID 0000-0003-3606-5722
University of Wisconsin–Madison · US

Funding

Creation and Repair of Postreplicative DNA GapsRM1GM130450 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Michael M. Cox, MYRON GOODMAN · 2019 to 2026
$10.4M
NIGMS NIH HHS RM1 GM130450
6 · The paper itself

Abstract

Most, but not all, homologous genetic recombination in bacteria is mediated by the RecA recombinase. The mechanistic origin of RecA-independent recombination has remained enigmatic. Here, we demonstrate that the RarA protein makes a major enzymatic contribution to RecA-independent recombination. In particular, RarA makes substantial contributions to intermolecular recombination and to recombination events involving relatively short (<200 bp) homologous sequences, where RecA-mediated recombination is inefficient. The effects are seen here in plasmid-based recombination assays and in vivo cloning processes. Vestigial levels of recombination remain even when both RecA and RarA are absent. Additional pathways for RecA-independent recombination, possibly mediated by helicases, are suppressed by exonucleases ExoI and RecJ. Translesion DNA polymerases may also contribute. Our results provide additional substance to a previous report of a functional overlap between RecA and RarA.

Indexed as

Adenosine TriphosphatasesBacterial ProteinsDNA, BacterialDNA-Binding ProteinsDNA HelicasesDNA RepairEscherichia coliEscherichia coli ProteinsExodeoxyribonucleasesHomologous RecombinationRec A RecombinasesAdenosine TriphosphatasesBacterial ProteinsDNA, BacterialDNA-Binding ProteinsDNA HelicasesEscherichia coli ProteinsExodeoxyribonucleasesMgsA protein, E colirecA protein, E coliRec A RecombinasesrecJ protein, Bacteriain vivo cloningMgs1RarARecArecombinationtranslesion DNA polymerases

Identifiers

PMID33247976
PMCPMC8160026
OpenAlexW3110455011

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.