ArticleScientific reports2020
The complete chloroplast genome sequences of five pinnate-leaved Primula species and phylogenetic analyses.
Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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13 citing papers in PubMed.
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- Phylogeny and comparative chloroplast genomics reveal a rare new short-styled homostylous species ofFrontiers in plant science · 2026Article
- Chloroplast genomes of nineFrontiers in plant science · 2026Article
- Comparative plastome analysis reveals evolutionary dynamics and codon usage patterns in Bidens (Asteraceae).Functional & integrative genomics · 2025Article
- Sequencing and characterizing the complete chloroplast genome ofFrontiers in plant science · 2025Article
- The complete chloroplast genome sequence ofMitochondrial DNA. Part B, Resources · 2024Article
- The Complete Chloroplast Genomes of Nine Smilacaceae Species from Hong Kong: Inferring Infra- and Inter-Familial Phylogeny.International journal of molecular sciences · 2023Article
- Complete chloroplast genome and phylogenetic analysis of Anemone shikokiana.Molecular biology reports · 2023Article
- Comparative analysis of chloroplast genomes of endangered heterostylous speciesEcology and evolution · 2023Article
- Article
- The Complete Chloroplast Genomes ofGenes · 2022Article
- PhytoKeys · 2022Article
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3 authors.
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Abstract
The six pinnate-leaved species are a very particular group in the genus Primula. In the present paper, we sequenced, assembled and annotated the chloroplast genomes of five of them (P. cicutarrifolia, P. hubeiensis, P. jiugongshanensis, P. merrilliana, P. ranunculoides). The five chloroplast genomes ranged from ~ 150 to 152 kb, containing 113 genes (four ribosomal RNA genes, 29 tRNA genes and 80 protein-coding genes). The six pinnate-leaved species exhibited synteny of gene order and possessed similar IR boundary regions in chloroplast genomes. The gene accD was pseudogenized in P. filchnerae. In the chloroplast genomes of the six pinnate-leaved Primula species, SSRs, repeating sequences and divergence hotspots were identified; ycf1 and trnH-psbA were the most variable markers among CDSs and noncoding sequences, respectively. Phylogenetic analyses showed that the six Primula species were separated into two distant clades: one was formed by P. filchnerae and P. sinensis and the other clade was consisting of two subclades, one formed by P. hubeiensis and P. ranunculoides, the other by P. merrilliana, P. cicutarrifolia and P. jiugongshanensis. P. hubeiensis was closely related with P. ranunculoides and therefore it should be placed into Sect. Ranunculoides. P. cicutarrifolia did not group first with P. ranunculoides but with P. merrilliana, although the former two were once united in one species, our results supported the separation of P. ranunculoides from P. cicutarrifolia as one distinct species.
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