Evidence map›Paper›PMID 33247164›Full record

ArticleScientific reports2020

The dehydrins gene expression differs across ecotypes in Norway spruce and relates to weather fluctuations.

Jaroslav Čepl, Jan Stejskal, Jiří Korecký, Jakub Hejtmánek, Zuzana Faltinová, Milan Lstibůrek, Salvador Gezan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Jaroslav ČeplFaculty of Forestry and Wood Sciences, Czech University of Life Sciences, Kamýcká 1176, 165 21, Praha 6, Suchdol, Czech Republic. cepl@fld.czu.cz.
Jan StejskalFaculty of Forestry and Wood Sciences, Czech University of Life Sciences, Kamýcká 1176, 165 21, Praha 6, Suchdol, Czech Republic.
Jiří KoreckýFaculty of Forestry and Wood Sciences, Czech University of Life Sciences, Kamýcká 1176, 165 21, Praha 6, Suchdol, Czech Republic.
Jakub HejtmánekFaculty of Forestry and Wood Sciences, Czech University of Life Sciences, Kamýcká 1176, 165 21, Praha 6, Suchdol, Czech Republic.
Zuzana FaltinováFaculty of Forestry and Wood Sciences, Czech University of Life Sciences, Kamýcká 1176, 165 21, Praha 6, Suchdol, Czech Republic.
Milan LstibůrekFaculty of Forestry and Wood Sciences, Czech University of Life Sciences, Kamýcká 1176, 165 21, Praha 6, Suchdol, Czech Republic.
Salvador GezanVSN International, Hamel Hamstead, UK.
Czech University of Life Sciences Prague · CZVSN International (United Kingdom) · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Norway spruce has a broad natural distribution range, which results in a substantial variety of its physiological and genetic variation. There are three distinct altitudinal ecotypes described in this tree species. The physiological optimum of each ecotype may be shifted due to ongoing climate change, especially in traits associated with water demand that might be crucial for adaptation. Dehydrins are proteins that help to mitigate the adverse effects of dehydration. Dehydrin gene expression patterns appeared to be a suitable marker for plant stress assessment. Genetically determined differences in response between individuals and populations were formerly studied, however, mainly in controlled conditions. We evaluated ecotypic variation in dehydrin gene expression in a clonal bank comprised of all three ecotypes. A genetic relationship among targeted trees was uncovered utilizing GBS (Genotyping by Sequencing) platform. We sampled 4-6 trees of each ecotype throughout 15 months period. Subsequently, we assessed the RNA expression of dehydrin genes by qRT-PCR. For this study, we deliberately selected dehydrins from different categories. Our findings detected significant differences among ecotypes in dehydrin expression. The association of recorded climatic variables and individual gene expression across the study period was evaluated and revealed, for certain genes, a correlation between dehydrin gene expression and precipitation, temperature, and day-length.

Indexed as

AcclimatizationClimate ChangeCzech RepublicDroughtsEcotypeGene Expression Regulation, PlantGenes, PlantPiceaPlant Proteinsdehydrin proteins, plantPlant Proteins

Identifiers

PMID33247164
PMCPMC7695824
OpenAlexW3106645741

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.