Evidence map›Paper›PMID 33247110›Full record

ArticleNature communications2020

The structural basis of promiscuity in small multidrug resistance transporters.

Ali A Kermani, Christian B Macdonald, Olive E Burata, B Ben Koff, Akiko Koide, Eric Denbaum, Shohei Koide, Randy B Stockbridge

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 54 citations in OpenAlex.

  1. Protonated Structure of EmrE Reveals C-terminal Tail Gating Mechanism.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Peripheral positions encode transport specificity in the small multidrug resistance exporters.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. A review of the mechanisms that confer antibiotic resistance in pathotypes ofFrontiers in cellular and infection microbiology · 2024
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Microsecond Motion of the Bacterial Transporter EmrE in Lipid Bilayers.Journal of the American Chemical Society · 2023
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ali A KermaniDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI, 48109, USA.
Christian B MacdonaldProgram in Biophysics, University of Michigan, Ann Arbor, MI, 48109, USA.ORCID 0000-0002-0201-8832
Olive E BurataProgram in Chemical Biology, University of Michigan, Ann Arbor, MI, 48109, USA.
B Ben KoffDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI, 48109, USA.
Akiko KoideLaura and Isaac Perlmutter Cancer Center, New York University Langone Medical Center, New York, NY, 10016, USA.
Eric DenbaumLaura and Isaac Perlmutter Cancer Center, New York University Langone Medical Center, New York, NY, 10016, USA.
Shohei KoideLaura and Isaac Perlmutter Cancer Center, New York University Langone Medical Center, New York, NY, 10016, USA.ORCID 0000-0001-5473-4358
Randy B StockbridgeDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI, 48109, USA. stockbr@umich.edu.ORCID 0000-0001-8848-3032
University of Michigan · USNYU Langone Health · US

Funding

Structural and functional analysis of novel microbial membrane proteinsR35GM128768 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Randy B. Stockbridge · 2018 to 2026
$3.7M
Molecular mechanisms of SHP2 signaling dissected with designer binding proteinsR01CA194864 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KOIDE, SHOHEI · 2016 to 2020
$1.8M
NCI NIH HHS R01 CA194864NIGMS NIH HHS R35 GM128768
6 · The paper itself

Abstract

By providing broad resistance to environmental biocides, transporters from the small multidrug resistance (SMR) family drive the spread of multidrug resistance cassettes among bacterial populations. A fundamental understanding of substrate selectivity by SMR transporters is needed to identify the types of selective pressures that contribute to this process. Using solid-supported membrane electrophysiology, we find that promiscuous transport of hydrophobic substituted cations is a general feature of SMR transporters. To understand the molecular basis for promiscuity, we solved X-ray crystal structures of a SMR transporter Gdx-Clo in complex with substrates to a maximum resolution of 2.3 Å. These structures confirm the family's extremely rare dual topology architecture and reveal a cleft between two helices that provides accommodation in the membrane for the hydrophobic substituents of transported drug-like cations.

Indexed as

Drug Resistance, Multiple, BacterialAmino Acid SequenceBacterial ProteinsBinding SitesBiological TransportCrystallography, X-RayEscherichia coliGene Transfer, HorizontalGuanineHydrophobic and Hydrophilic InteractionsMembrane Transport ProteinsModels, MolecularRiboswitchSubstrate SpecificityBacterial ProteinsGuanineMembrane Transport ProteinsRiboswitch

Identifiers

PMID33247110
PMCPMC7695847
OpenAlexW3108898263

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.