Evidence map›Paper›PMID 33247098›Full record

ArticleNature communications2020

Mechanism and inhibition of Streptococcus pneumoniae IgA1 protease.

Zhiming Wang, Jeremy Rahkola, Jasmina S Redzic, Ying-Chih Chi, Norman Tran, Todd Holyoak, Hongjin Zheng, Edward Janoff, Elan Eisenmesser

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Structure of theProceedings of the National Academy of Sciences of the United States of America · 2025
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  4. Article
  5. Article
  6. Host Serum Amyloid A1 FacilitatesMicroorganisms · 2025
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  7. The structure of the Gemella haemolysans M26 IgA1 protease trypsin-like domain.Acta crystallographica. Section F, Structural biology communications · 2025
    Article
  8. Trichocystatin-2 fromFrontiers in parasitology · 2025
    Article
  9. Article
  10. Effects ofFrontiers in molecular biosciences · 2024
    Article
  11. Article
  12. Article
  13. Inhibition ofMicrobiology (Reading, England) · 2022
    Article
  14. Article
  15. Article
  16. Review
  17. Immunoglobulin A Glycosylation and Its Role in Disease.Experientia supplementum (2012) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Zhiming WangDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Denver, School of Medicine, Aurora, CO, 80045, USA.
Jeremy RahkolaMucosal and Vaccine Research Program Colorado, Division of Infectious Disease, University of Colorado Denver School of Medicine and Denver Veterans Affairs Medical Center, Aurora, CO, 80045, USA.
Jasmina S RedzicDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Denver, School of Medicine, Aurora, CO, 80045, USA.
Ying-Chih ChiCryo-EM Center, Vagelos College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, 10032, USA.
Norman TranDepartment of Biology, University of Waterloo, Waterloo, ON, Canada, N2L 3G1.
Todd HolyoakDepartment of Biology, University of Waterloo, Waterloo, ON, Canada, N2L 3G1.ORCID 0000-0002-7329-1115
Hongjin ZhengDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Denver, School of Medicine, Aurora, CO, 80045, USA. Hongjin.Zhing@ucdenver.edu.ORCID 0000-0001-5324-6264
Edward JanoffMucosal and Vaccine Research Program Colorado, Division of Infectious Disease, University of Colorado Denver School of Medicine and Denver Veterans Affairs Medical Center, Aurora, CO, 80045, USA. Edward.Janoff@cuanschutz.edu.ORCID 0000-0003-2702-5729
Elan EisenmesserDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Denver, School of Medicine, Aurora, CO, 80045, USA. Elan.Eisenmesser@ucdenver.edu.ORCID 0000-0002-6967-0892
University of Colorado Denver · USUniversity of Waterloo · CAColumbia University · USDenver VA Medical Center · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Pacific Northwest Center for Cryo-EM - Screening supplementU24GM129547 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI EVANS, JAMES E, GOUAUX, JAMES E · 2018 to 2023
$54.8M
Mechanisms of Impaired HIV-associated B cell and Pneumococcal Vaccine responsesR01AI108479 · NIAID · UNIVERSITY OF COLORADO DENVER · PI JANOFF, EDWARD N · 2014 to 2018
$2.3M
Mechanistic studies of prokaryotic and eukaryotic nitrate/nitrite transportR01GM126626 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI ZHENG, HONGJIN · 2018 to 2022
$1.7M
Determining how the giant Streptococcus Pneumoniae IgA1 protease cleaves its host IgA1 substrate and how this interaction can be blockedR21AI146295 · NIAID · UNIVERSITY OF COLORADO DENVER · PI EISENMESSER, ELAN Z · 2020 to 2021
$428k
Cross-serotype protection against Streptococcus pneumoniae by induction of neutraR21AI092468 · NIAID · UNIVERSITY OF COLORADO DENVER · PI JANOFF, EDWARD N · 2011 to 2012
$421k
Mitochondrial Amyloid Beta accumulation via non-canonical receptor Tom22R21AG064572 · NIA · UNIVERSITY OF COLORADO DENVER · PI ZHENG, HONGJIN · 2020 to 2020
$416k
BLRD VA I01 BX004320CSRD VA I01 CX001464NCI NIH HHS P30 CA046934NIAID NIH HHS R01 AI108479NIAID NIH HHS R21 AI092468NIAID NIH HHS R21 AI146295NIA NIH HHS R21 AG064572NIGMS NIH HHS R01 GM126626NIGMS NIH HHS U24 GM129547
6 · The paper itself

Abstract

Opportunistic pathogens such as Streptococcus pneumoniae secrete a giant metalloprotease virulence factor responsible for cleaving host IgA1, yet the molecular mechanism has remained unknown since their discovery nearly 30 years ago despite the potential for developing vaccines that target these enzymes to block infection. Here we show through a series of cryo-electron microscopy single particle reconstructions how the Streptococcus pneumoniae IgA1 protease facilitates IgA1 substrate recognition and how this can be inhibited. Specifically, the Streptococcus pneumoniae IgA1 protease subscribes to an active-site-gated mechanism where a domain undergoes a 10.0 Å movement to facilitate cleavage. Monoclonal antibody binding inhibits this conformational change, providing a direct means to block infection at the host interface. These structural studies explain decades of biological and biochemical studies and provides a general strategy to block Streptococcus pneumoniae IgA1 protease activity to potentially prevent infection.

Indexed as

Antibodies, MonoclonalBiocatalysisCatalytic DomainCryoelectron MicroscopyModels, MolecularProtease InhibitorsProtein BindingSerine EndopeptidasesStreptococcus pneumoniaeAntibodies, MonoclonalIgA-specific serine endopeptidaseProtease InhibitorsSerine Endopeptidases

Identifiers

PMID33247098
PMCPMC7695701
OpenAlexW3108792265

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.