Evidence map›Paper›PMID 33245857›Full record

ArticleCell host & microbe2020

Integrative Imaging Reveals SARS-CoV-2-Induced Reshaping of Subcellular Morphologies.

Mirko Cortese, Ji-Young Lee, Berati Cerikan, Christopher J Neufeldt, Viola M J Oorschot, Sebastian Köhrer, Julian Hennies, Nicole L Schieber, Paolo Ronchi, Giulia Mizzon and 19 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 223 papers.

0numbers the graph read from it
0cells of the map it votes in
223citing papers in PubMed
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

223 citing papers in PubMed, 334 citations in OpenAlex.

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163 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 7 institutions in 2 countries.

Mirko CorteseDepartment of Infectious Diseases, Molecular Virology, Heidelberg University, 69120 Heidelberg, Germany. Electronic address: mirko.cortese@med.uni-heidelberg.de.
Ji-Young LeeDepartment of Infectious Diseases, Molecular Virology, Heidelberg University, 69120 Heidelberg, Germany; German Center for Infection Research, Heidelberg partner site, Heidelberg, Germany.
Berati CerikanDepartment of Infectious Diseases, Molecular Virology, Heidelberg University, 69120 Heidelberg, Germany.
Christopher J NeufeldtDepartment of Infectious Diseases, Molecular Virology, Heidelberg University, 69120 Heidelberg, Germany.
Viola M J OorschotElectron Microscopy Core Facility, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Sebastian KöhrerCell Biology and Biophysics Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany; Clinical Cooperation Unit Molecular Hematology/Oncology, German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany.
Julian HenniesCell Biology and Biophysics Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany; Collaboration for joint PhD degree between EMBL and Heidelberg University, Faculty of Biosciences, Heidelberg, Germany.
Nicole L SchieberCell Biology and Biophysics Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Paolo RonchiElectron Microscopy Core Facility, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Giulia MizzonCell Biology and Biophysics Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany; Electron Microscopy Core Facility, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Inés Romero-BreyCell Biology and Biophysics Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Rachel Santarella-MellwigElectron Microscopy Core Facility, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Martin SchorbElectron Microscopy Core Facility, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Mandy BoermelElectron Microscopy Core Facility, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Karel MocaerCell Biology and Biophysics Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Marianne S BeckwithCell Biology and Biophysics Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Rachel M TemplinCell Biology and Biophysics Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Viktoriia GrossCell Biology and Biophysics Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Constantin PapeInterdisciplinary Center for Scientific Computing, Heidelberg University, Heidelberg, Germany; European Molecular Biology Laboratory (EMBL), 69117 Heidelberg, Germany.
Christian TischerCenter for Bioimage Analysis, European Molecular Biology Laboratory, Heidelberg, Germany.
Jamie FrankishBioMed X Institute, BioMed X GmbH, 69120 Heidelberg, Germany.
Natalie K HorvatEuropean Molecular Biology Laboratory (EMBL), 69117 Heidelberg, Germany; Molecular Medicine Partnership Unit (MMPU), Otto-Meyerhof-Zentrum, Im Neuenheimer Feld 350, 69120 Heidelberg, Germany.
Vibor LaketaGerman Center for Infection Research, Heidelberg partner site, Heidelberg, Germany.
Megan StaniferDepartment of Infectious Diseases, Molecular Virology, Heidelberg University, 69120 Heidelberg, Germany.
Steeve BoulantResearch Group "Cellular polarity and viral infection," German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany; Department of Infectious Diseases, Virology, Heidelberg University, 69120 Heidelberg, Germany.
Alessia RuggieriDepartment of Infectious Diseases, Molecular Virology, Heidelberg University, 69120 Heidelberg, Germany.
Laurent Chatel-ChaixInstitut National de la Recherche Scientifique, Centre Armand-Frappier Santé Biotechnologie, 531, Boulevard des Prairies Laval, Québec, QC H7V 1B7, Canada.
Yannick SchwabCell Biology and Biophysics Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany; Electron Microscopy Core Facility, European Molecular Biology Laboratory, 69117 Heidelberg, Germany. Electronic address: yannick.schwab@embl.de.
Ralf BartenschlagerDepartment of Infectious Diseases, Molecular Virology, Heidelberg University, 69120 Heidelberg, Germany; German Center for Infection Research, Heidelberg partner site, Heidelberg, Germany; Division Virus-Associated Carcinogenesis, German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany. Electronic address: ralf.bartenschlager@med.uni-heidelberg.de.
European Molecular Biology Laboratory · DEHeidelberg University · DEEuropean Molecular Biology Laboratory · DEGerman Center for Infection Research · DEBioMed X Institute · DEGerman Cancer Research Center · DEInstitut National de la Recherche Scientifique · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pathogenesis induced by SARS-CoV-2 is thought to result from both an inflammation-dominated cytokine response and virus-induced cell perturbation causing cell death. Here, we employ an integrative imaging analysis to determine morphological organelle alterations induced in SARS-CoV-2-infected human lung epithelial cells. We report 3D electron microscopy reconstructions of whole cells and subcellular compartments, revealing extensive fragmentation of the Golgi apparatus, alteration of the mitochondrial network and recruitment of peroxisomes to viral replication organelles formed by clusters of double-membrane vesicles (DMVs). These are tethered to the endoplasmic reticulum, providing insights into DMV biogenesis and spatial coordination of SARS-CoV-2 replication. Live cell imaging combined with an infection sensor reveals profound remodeling of cytoskeleton elements. Pharmacological inhibition of their dynamics suppresses SARS-CoV-2 replication. We thus report insights into virus-induced cytopathic effects and provide alongside a comprehensive publicly available repository of 3D datasets of SARS-CoV-2-infected cells for download and smooth online visualization.

Indexed as

Cell DeathCOVID-19Endoplasmic ReticulumHumansMicroscopy, ElectronPandemicsSARS-CoV-2Viral Replication CompartmentsVirus Replicationcoronaviruscytoskeletonelectron tomographyFIB-SEMGolgiintermediate filamentslive cell imagingmembrane remodelingperoxisomesviral replication organelles

Identifiers

PMID33245857
PMCPMC7670925
OpenAlexW3102708391

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.