Evidence map›Paper›PMID 33243093›Full record

ArticleTechnology in cancer research & treatment

TP53-Associated Ion Channel Genes Serve as Prognostic Predictor and Therapeutic Targets in Head and Neck Squamous Cell Carcinoma.

Jing Sun, Xijiao Yu, Lande Xue, Shu Li, Jianxia Li, Dongdong Tong, Yi Du

Open access · goldAbstract read
In one paragraph

Article in Technology in cancer research & treatment. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Jing SunDepartment of Periodontology, Jinan Stomatological Hospital, Jinan, Shandong, China.
Xijiao YuDepartment of Endodontics, Jinan Stomatological Hospital, Jinan, Shandong, China.
Lande XueDepartment of Periodontology, Jinan Stomatological Hospital, Jinan, Shandong, China.
Shu LiHospital of Stomatology, 12589Shandong University & Shandong Key Laboratory of Oral Tissue Regeneration & Shandong Engineering Laboratory for Dental Materials and Oral Tissue Regeneration, Jinan, Shandong, China.
Jianxia LiDepartment of Periodontology, Jinan Stomatological Hospital, Jinan, Shandong, China.
Dongdong TongDepartment of Oral and Maxillofacial, School and Hospital of Stomatology, 12589Shandong University & Shandong Key Laboratory of Oral Tissue Regeneration & Shandong Engineering Laboratory for Dental Materials and Oral Tissue Regeneration, Jinan, Shandong, China.ORCID 0000-0002-5498-8582
Yi DuDepartment of Endodontics, Jinan Stomatological Hospital, Jinan, Shandong, China.
Jinan Stomatological Hospital · CNShandong University · CNZero to Three · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TP53 mutations are the most occurred mutation in HNSCC which might affect the ion channel genes. We aim to investigate the ion channel gene alteration under TP53 mutation and their prognostic implication. The overall mutation status of HNSCC were explored. By screening the TP53-associated ion channel genes (TICGs), an ion channel prognostic signature (ICPS) was established through a series of machine learning algorithms. The ICPS was then evaluated and its clinical significance was explored. 82 TICGs differentially expressed between TP53WT and TP53MUT were screened. Using univariate regression analysis and LASSO regression analysis and multivariate regression analysis, an ICPS containing 7 ion channel genes was established. A series of evaluation was carried out which proved the predictive ability of ICPS. Functional analysis of ICPS revealed that cancer-related pathways were enriched in high-risk group. Next, for clinical application, a nomogram was constructed based on ICPS and other independent clinicopathological factors. TP53 mutation status strongly affects the expression of ion channel genes. The ICPM we have identified is a strong indicator for HNSCC prognosis and could help with patient stratification as well as identification of novel drug targets.

Indexed as

Gene Expression Regulation, NeoplasticBiomarkers, TumorComputational BiologyDNA Mutational AnalysisGene Expression ProfilingHumansIon ChannelsKaplan-Meier EstimateMolecular Targeted TherapyMutationNomogramsPrognosisROC CurveSquamous Cell Carcinoma of Head and NeckTumor Suppressor Protein p53Biomarkers, TumorIon ChannelsTP53 protein, humanTumor Suppressor Protein p53BIOMARKERhead and neck squamous cell carcinomaion channelPROGNOSIStherapeutic targetsTP53

Identifiers

PMID33243093
PMCPMC7705194
OpenAlexW3107847267

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.