Evidence map›Paper›PMID 33242116›Full record

ArticleBrain informatics2020

Density-based clustering of static and dynamic functional MRI connectivity features obtained from subjects with cognitive impairment.

D Rangaprakash, Toluwanimi Odemuyiwa, D Narayana Dutt, Gopikrishna Deshpande, Alzheimer’s Disease Neuroimaging Initiative

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Article in Brain informatics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

D RangaprakashAthinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA.
Toluwanimi OdemuyiwaDivision of Engineering Science, Faculty of Applied Science & Engineering, University of Toronto, Toronto, ON, Canada.
D Narayana DuttDepartment of Electrical Communication Engineering, Indian Institute of Science, Bangalore, India.
Gopikrishna DeshpandeAU MRI Research Center, Department of Electrical and Computer Engineering, Auburn University, 560 Devall Dr, Suite 266D, Auburn, AL, 36849, USA. gopi@auburn.edu.ORCID http://orcid.org/0000-0001-7471-5357
Alzheimer’s Disease Neuroimaging Initiative

Funding

Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
NIA NIH HHS U01 AG024904
6 · The paper itself

Abstract

Various machine-learning classification techniques have been employed previously to classify brain states in healthy and disease populations using functional magnetic resonance imaging (fMRI). These methods generally use supervised classifiers that are sensitive to outliers and require labeling of training data to generate a predictive model. Density-based clustering, which overcomes these issues, is a popular unsupervised learning approach whose utility for high-dimensional neuroimaging data has not been previously evaluated. Its advantages include insensitivity to outliers and ability to work with unlabeled data. Unlike the popular k-means clustering, the number of clusters need not be specified. In this study, we compare the performance of two popular density-based clustering methods, DBSCAN and OPTICS, in accurately identifying individuals with three stages of cognitive impairment, including Alzheimer's disease. We used static and dynamic functional connectivity features for clustering, which captures the strength and temporal variation of brain connectivity respectively. To assess the robustness of clustering to noise/outliers, we propose a novel method called recursive-clustering using additive-noise (R-CLAN). Results demonstrated that both clustering algorithms were effective, although OPTICS with dynamic connectivity features outperformed in terms of cluster purity (95.46%) and robustness to noise/outliers. This study demonstrates that density-based clustering can accurately and robustly identify diagnostic classes in an unsupervised way using brain connectivity.

Indexed as

Brain networks and dynamic connectivityCognitive impairment and alzheimer’s diseaseDBSCANFunctional MRIOPTICSUnsupervised learning and clustering

Identifiers

PMID33242116
PMCPMC7691406

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.