Evidence map›Paper›PMID 33241976›Full record

ArticleInnate immunity2021

Comprehensive analysis of neuronal guidance cue expression regulation during monocyte-to-macrophage differentiation reveals post-transcriptional regulation of semaphorin7A by the RNA-binding protein quaking.

Huayu Zhang, Jurriën Prins, Dianne Vreeken, Barend W Florijn, Ruben G de Bruin, Oscar Rj van Hengel, Mieke F van Essen, Jacques Mgj Duijs, Hilde Van Esch, Eric P van der Veer and 2 more

Open access · goldAbstract read
In one paragraph

Article in Innate immunity, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Beyond transcription: RNA-binding proteins steering angiogenesis.American journal of physiology. Heart and circulatory physiology · 2026
    Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Huayu ZhangEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.
Jurriën PrinsEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.
Dianne VreekenEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.ORCID 0000-0002-8228-8233
Barend W FlorijnEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.
Ruben G de BruinEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.
Oscar Rj van HengelEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.
Mieke F van EssenEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.
Jacques Mgj DuijsEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.
Hilde Van EschDepartment of Human Genetics, University Hospitals Leuven, Belgium.
Eric P van der VeerEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.
Anton Jan van ZonneveldEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.
Janine M van GilsEinthoven Laboratory for Vascular and Regenerative Medicine, Department of Internal Medicine, Leiden University Medical Centre, The Netherlands.ORCID 0000-0003-2429-7462
Leiden University Medical Center · NLKU Leuven · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In response to inflammatory cytokines and chemokines, monocytes differentiate into macrophages. Comprehensive analysis of gene expression regulation of neuronal guidance cue (NGC) ligands and receptors in the monocyte-to-macrophage differentiation process is not available yet. We performed transcriptome profiling in both human primary PBMCs/PBMC-derived macrophages and THP-1 cells/THP-1-macrophages using microarray or RNA sequencing methods. Pathway analysis showed that the axonal guidance pathway is significantly regulated upon monocyte differentiation. We confirmed NGC ligands and receptors which were consistently regulated, including SEMA4D, SEMA7A, NRP1, NRP2, PLXNA1 and PLXNA3. The involvement of RNA-binding protein quaking (QKI) in the regulation of NGC expression was investigated using monocytes and macrophages from a QKI haplo-insufficient patient and her healthy sibling. This revealed a positive correlation of SEMA7A expression with QKI expression.

Indexed as

3' Untranslated RegionsAxon GuidanceCell DifferentiationFemaleGene Expression ProfilingHaploinsufficiencyHumansMacrophagesMicroRNAsMonocytesPrimary Cell CultureRNARNA-Binding ProteinsRNA Processing, Post-TranscriptionalSemaphorinsSiblings3' Untranslated RegionsMicroRNAsQKI protein, humanRNARNA-Binding ProteinsSemaphorinsmacrophagemicroRNAMonocytequakingsemaphorin

Identifiers

PMID33241976
PMCPMC7882812
OpenAlexW3109671751

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.