Evidence map›Paper›PMID 33240760›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2020

A Single-Stranded DNA-Encoded Chemical Library Based on a Stereoisomeric Scaffold Enables Ligand Discovery by Modular Assembly of Building Blocks.

Gabriele Bassi, Nicholas Favalli, Miriam Vuk, Marco Catalano, Adriano Martinelli, Anika Trenner, Antonio Porro, Su Yang, Chuin Lean Tham, Mustafa Moroglu and 6 more

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Mask and Release Strategy-Enabled Diversity-Oriented Synthesis for DNA-Encoded Library.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  7. Small-molecule discovery through DNA-encoded libraries.Nature reviews. Drug discovery · 2023
    Review
  8. Structural insights into the interaction of three Y-shaped ligands with PI3Kα.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Article
  11. Nanobodies and chemical cross-links advance the structural and functional analysis of PI3Kα.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Gabriele BassiDepartment of Chemistry and Applied Biosciences ETH Zürich Zürich 8092 Switzerland.ORCID https://orcid.org/0000-0003-3617-9578
Nicholas FavalliDepartment of Chemistry and Applied Biosciences ETH Zürich Zürich 8092 Switzerland.ORCID https://orcid.org/0000-0002-6538-7379
Miriam VukDepartment of Chemistry and Applied Biosciences ETH Zürich Zürich 8092 Switzerland.
Marco CatalanoDepartment of Chemistry and Applied Biosciences ETH Zürich Zürich 8092 Switzerland.
Adriano MartinelliDepartment of Chemistry and Applied Biosciences ETH Zürich Zürich 8092 Switzerland.
Anika TrennerInstitute of Molecular Cancer Research University of Zürich Zürich 8006 Switzerland.
Antonio PorroInstitute of Molecular Cancer Research University of Zürich Zürich 8006 Switzerland.
Su YangScripps Research Institute Department of Molecular Medicine La Jolla CA 92037 USA.
Chuin Lean ThamStructural Genomic Consortium (SGC) Nuffield Department of Medicine University of Oxford Oxford OX1 2JD UK.
Mustafa MorogluDepartment of Chemistry Chemistry Research Laboratory University of Oxford Mansfield Road Oxford OX1 3TA UK.
Wyatt W YueStructural Genomic Consortium (SGC) Nuffield Department of Medicine University of Oxford Oxford OX1 2JD UK.
Stuart J ConwayDepartment of Chemistry Chemistry Research Laboratory University of Oxford Mansfield Road Oxford OX1 3TA UK.
Peter K VogtScripps Research Institute Department of Molecular Medicine La Jolla CA 92037 USA.
Alessandro A SartoriInstitute of Molecular Cancer Research University of Zürich Zürich 8006 Switzerland.
Jörg ScheuermannDepartment of Chemistry and Applied Biosciences ETH Zürich Zürich 8092 Switzerland.ORCID https://orcid.org/0000-0001-7746-4717
Dario NeriDepartment of Chemistry and Applied Biosciences ETH Zürich Zürich 8092 Switzerland.ORCID https://orcid.org/0000-0001-5234-7370

Funding

Cancer genes: translating basics to applicationsR35CA197582 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI VOGT, PETER K · 2016 to 2022
$7.8M
NCI NIH HHS R35 CA197582
6 · The paper itself

Abstract

A versatile and Lipinski-compliant DNA-encoded library (DEL), comprising 366 600 glutamic acid derivatives coupled to oligonucleotides serving as amplifiable identification barcodes is designed, constructed, and characterized. The GB-DEL library, constructed in single-stranded DNA format, allows de novo identification of specific binders against several pharmaceutically relevant proteins. Moreover, hybridization of the single-stranded DEL with a set of known protein ligands of low to medium affinity coupled to a complementary DNA strand results in self-assembled selectable chemical structures, leading to the identification of affinity-matured compounds.

Indexed as

affinity maturationcyclic‐AMP response element binding protein (CREBBP)DNA‐encoded chemical libraries (DEL)drug discoveryencoded self‐assembling chemical libraries (ESAC)FANCD2‐associated nuclease 1 (FAN‐1)Human alpha‐aminoadipic semialdehyde synthase (AASS)phosphatidylinositol 3‐kinase (PI3K)

Identifiers

PMID33240760
PMCPMC7675038

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.