Evidence map›Paper›PMID 33240310›Full record

ArticleFrontiers in genetics2020

Putative Epigenetic Biomarkers of Stress in Red Blood Cells of Chickens Reared Across Different Biomes.

Fábio Pértille, Adriana Mercia Guaratini Ibelli, Maj El Sharif, Mirele Daiana Poleti, Anna Sophie Fröhlich, Shiva Rezaei, Mônica Corrêa Ledur, Per Jensen, Carlos Guerrero-Bosagna, Luiz Lehmann Coutinho

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Can eggshells indicate stressor exposure in free-range laying hens?Animal welfare (South Mimms, England) · 2024
    Article
  5. Article
  6. Chicken Erythrocyte: Epigenomic Regulation of Gene Activity.International journal of molecular sciences · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. How Epigenetics Can Enhance Pig Welfare?Animals : an open access journal from MDPI · 2021
    Review
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Fábio PértilleAnimal Biotechnology Laboratory, Animal Science and Pastures Department, University of São Paulo (USP)/"Luiz de Queiroz" College of Agriculture (ESALQ), Piracicaba, Brazil.
Adriana Mercia Guaratini IbelliEmbrapa Suínos e Aves, Concórdia, Brazil.
Maj El SharifAvian Behavioural Genomics and Physiology Group, IFM Biology, Linköping University, Linköping, Sweden.
Mirele Daiana PoletiAnimal Science Program, Faculty of Animal Science and Food Engineering (FZEA), University of São Paulo (USP), Pirassununga, Brazil.
Anna Sophie FröhlichAvian Behavioural Genomics and Physiology Group, IFM Biology, Linköping University, Linköping, Sweden.
Shiva RezaeiAvian Behavioural Genomics and Physiology Group, IFM Biology, Linköping University, Linköping, Sweden.
Mônica Corrêa LedurEmbrapa Suínos e Aves, Concórdia, Brazil.
Per JensenAvian Behavioural Genomics and Physiology Group, IFM Biology, Linköping University, Linköping, Sweden.
Carlos Guerrero-BosagnaAvian Behavioural Genomics and Physiology Group, IFM Biology, Linköping University, Linköping, Sweden.
Luiz Lehmann CoutinhoAnimal Biotechnology Laboratory, Animal Science and Pastures Department, University of São Paulo (USP)/"Luiz de Queiroz" College of Agriculture (ESALQ), Piracicaba, Brazil.
Linköping University · SEBrazilian Agricultural Research Corporation · BRUniversidade de São Paulo · BRUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Production animals are constantly subjected to early adverse environmental conditions that influence the adult phenotype and produce epigenetic effects. CpG dinucleotide methylation in red blood cells (RBC) could be a useful epigenetic biomarker to identify animals subjected to chronic stress in the production environment. Here we compared a reduced fraction of the RBC methylome of chickens exposed to social isolation to non-exposed. These experiments were performed in two different locations: Brazil and Sweden. The aim was to identify stress-associated DNA methylation profiles in RBC across these populations, in spite of the variable conditions to which birds are exposed in each facility and their different lineages. Birds were increasingly exposed to a social isolation treatment, combined with food and water deprivation, at random periods of the day from weeks 1-4 after hatching. We then collected the RBC DNA from individuals and compared a reduced fraction of their methylome between the experimental groups using two bioinformatic approaches to identify differentially methylated regions (DMRs): one using fixed-size windows and another that preselected differential peaks with MACS2. Three levels of significance were used (

Indexed as

animal welfarechickenDNA methylationepigeneticsred blood cellsstress

Identifiers

PMID33240310
PMCPMC7667380
OpenAlexW3094701735

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.