Evidence map›Paper›PMID 33240261›Full record

ArticleFrontiers in immunology2020

Dynamic Transcriptome Reveals the Mechanism of Liver Injury Caused by DHAV-3 Infection in Pekin Duck.

Junting Cao, Yunsheng Zhang, Ying Chen, Suyun Liang, Dapeng Liu, Wenlei Fan, Yaxi Xu, Hehe Liu, Zhengkui Zhou, Xiaolin Liu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Junting CaoShaanxi Key Laboratory of Molecular Biology for Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, China.
Yunsheng ZhangMinistry of Agriculture Key Laboratory of Animal Genetics Breeding and Reproduction (Poultry), Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Ying ChenMinistry of Agriculture Key Laboratory of Animal Genetics Breeding and Reproduction (Poultry), Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Suyun LiangMinistry of Agriculture Key Laboratory of Animal Genetics Breeding and Reproduction (Poultry), Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Dapeng LiuMinistry of Agriculture Key Laboratory of Animal Genetics Breeding and Reproduction (Poultry), Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Wenlei FanMinistry of Agriculture Key Laboratory of Animal Genetics Breeding and Reproduction (Poultry), Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Yaxi XuShaanxi Key Laboratory of Molecular Biology for Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, China.
Hehe LiuMinistry of Agriculture Key Laboratory of Animal Genetics Breeding and Reproduction (Poultry), Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Zhengkui ZhouMinistry of Agriculture Key Laboratory of Animal Genetics Breeding and Reproduction (Poultry), Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Xiaolin LiuShaanxi Key Laboratory of Molecular Biology for Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, China.
Shuisheng HouMinistry of Agriculture Key Laboratory of Animal Genetics Breeding and Reproduction (Poultry), Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Chinese Academy of Agricultural Sciences · CNNorthwest A&F University · CNQingdao Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Duck hepatitis A virus 3 (DHAV-3) is a wild endemic virus, which seriously endangers the duck industry in China. The present study aims to elucidate the mechanism of duck resistance to DHAV-3 infection. Both resistant and susceptible ducks were challenged with DHAV-3 in this experiment. The histopathological features and serum biochemical indices (ALT and AST) were analyzed to estimate liver injury status at 6, 12, 15, and 24 h post-infection (hpi). The dynamic transcriptomes of liver were analyzed to explain the molecular regulation mechanism in ducks against DHAV-3. The result showed that the liver injury in susceptible ducks was more serious than that in the resistant ducks throughout the four time points. A total of 2,127 differentially expressed genes (DEGs) were identified by comparing the transcriptome of the two populations. The expression levels of genes involved in innate immune response increased rapidly in susceptible ducks from 12 hpi. Similarly, the expression of genes involved in cytokine regulation also increased at the same time points, while the expression levels of these genes in resistant ducks remained similar between the various time points. KEGG enrichment analysis of the DEGs revealed that the genes involved in cytokine regulation and apoptosis were highly expressed in susceptible ducks than that in resistant ducks, suggesting that excessive cytokine storm and apoptosis may partially explain the mechanism of liver injury caused by DHAV-3 infection. Besides, we found that the

Indexed as

Hepatitis Virus, DuckAnimalsDucksHepatitis, Viral, AnimalLiverPicornaviridae InfectionsPoultry DiseasesTranscriptomeapoptosisduckduck hepatitis A virus 3liverRNA-seq

Identifiers

PMID33240261
PMCPMC7677298
OpenAlexW3096022474

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.