ArticleNature2020
The barley pan-genome reveals the hidden legacy of mutation breeding.
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Article in Nature, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 289 papers, 3 of them syntheses that pooled it.
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289citing papers in PubMed, 3 pooled it
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289 citing papers in PubMed, 3 syntheses or guidelines pooled it.
- New loci and candidate genes in spring two-rowed barley detected through meta-analysis of a field trial European network.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Pooled it
- Advancing crop improvement through GWAS and beyond in mung bean.Frontiers in plant science · 2024Pooled it
- The Effect of Methodological Considerations on the Construction of Gene-Based Plant Pan-genomes.Genome biology and evolution · 2023Pooled it
- Review
- Genome-wide identification and evolutionary analysis of the ERF-VII gene family in the tea plant (Camellia sinensis) and functional characterization of CsRAP2.2 in response to cold stress.Plant cell reports · 2026Article
- Haplotype Blocks Are Associated With Rapid Local Adaptation to Environmental Shifts in Wild Barley.Molecular ecology · 2026Article
- Advances in genomics-driven genetic decoding and genomic design breeding in tomato.Horticulture research · 2026Article
- Harnessing genomics approaches for heat stress resilience in wheat: from discovery to deployment.Journal of experimental botany · 2026Review
- Unveiling centromeric retrotransposon dynamics through a high-quality rye genome assembly.Nature communications · 2026Article
- Spatial Regulation of Silicon Accumulation in Peduncle Confers Sheathed Spike in Barley.Plant biotechnology journal · 2026Article
- Golden Promise-rapid, a fast-cycling and transformable barley genotype.Journal of experimental botany · 2026Article
- Nanopore sequencing reveals coordinated host and microbiome responses across barley genotypes.BMC biology · 2026Article
- Integrated Comparative Genomics and Population Genomics Reveal the Genomic and Epigenomic Basis of Barley (Plants (Basel, Switzerland) · 2026Article
- Article
- Review
- Graph-based pan-genome reveals structural variations associated with agronomic traits in mung bean.Nature genetics · 2026Article
- TWGFD: an integrative platform for tetraploid wheat gene family analysis.BMC genomics · 2026Article
- Large-scale structural variations induced by transposable elements promote population-specific divergence in Triticum turgidum ssp. dicoccoides.BMC plant biology · 2026Article
- Vernalization regulatory network identifies potential novel functions for genes in the HvVRN2 locus.The New phytologist · 2026Article
- Review
229 more citing papers are in PubMed but not listed here.
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Authors and funding
44 authors.
Murukarthick Jayakodi *Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID http://orcid.org/0000-0003-2951-0541
Sudharsan Padmarasu *Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID http://orcid.org/0000-0003-3125-3695
Georg HabererPlant Genome and Systems Biology (PGSB), Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.
Venkata Suresh BonthalaPlant Genome and Systems Biology (PGSB), Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.ORCID http://orcid.org/0000-0001-6550-1648
Heidrun GundlachPlant Genome and Systems Biology (PGSB), Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.ORCID http://orcid.org/0000-0002-6757-0943
Cécile MonatLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID http://orcid.org/0000-0002-0574-3976
Thomas LuxPlant Genome and Systems Biology (PGSB), Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.ORCID http://orcid.org/0000-0002-5543-1911
Nadia KamalPlant Genome and Systems Biology (PGSB), Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.
Daniel LangPlant Genome and Systems Biology (PGSB), Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.ORCID http://orcid.org/0000-0002-2166-0716
Axel HimmelbachLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Jennifer EnsDepartment of Plant Sciences, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.ORCID http://orcid.org/0000-0003-2663-1006
Xiao-Qi ZhangWestern Barley Genetics Alliance, State Agricultural Biotechnology Centre, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, Western Australia, Australia.
Tefera T AngessaWestern Barley Genetics Alliance, State Agricultural Biotechnology Centre, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, Western Australia, Australia.ORCID http://orcid.org/0000-0002-2400-1732
Gaofeng ZhouWestern Barley Genetics Alliance, State Agricultural Biotechnology Centre, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, Western Australia, Australia.
Cong TanWestern Barley Genetics Alliance, State Agricultural Biotechnology Centre, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, Western Australia, Australia.
Camilla HillWestern Barley Genetics Alliance, State Agricultural Biotechnology Centre, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, Western Australia, Australia.
Penghao WangWestern Barley Genetics Alliance, State Agricultural Biotechnology Centre, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, Western Australia, Australia.
Miriam SchreiberThe James Hutton Institute, Dundee, UK.
Lori B BostonHudsonAlpha, Institute for Biotechnology, Huntsville, AL, USA.
Christopher PlottHudsonAlpha, Institute for Biotechnology, Huntsville, AL, USA.
Jerry JenkinsHudsonAlpha, Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0002-7943-3997
Yu GuoLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Anne FiebigLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Hikmet BudakMontana BioAg Inc, Missoula, MT, USA.ORCID http://orcid.org/0000-0002-2556-2478
Dongdong XuInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (ICS-CAAS), Beijing, China.
Jing ZhangInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (ICS-CAAS), Beijing, China.
Chunchao WangInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (ICS-CAAS), Beijing, China.
Jane GrimwoodHudsonAlpha, Institute for Biotechnology, Huntsville, AL, USA.
Jeremy SchmutzHudsonAlpha, Institute for Biotechnology, Huntsville, AL, USA.ORCID http://orcid.org/0000-0001-8062-9172
Ganggang GuoInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences (ICS-CAAS), Beijing, China.ORCID http://orcid.org/0000-0001-9970-5382
Guoping ZhangCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
Keiichi MochidaBioproductivity Informatics Research Team, RIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Takashi HirayamaInstitute of Plant Science and Resources, Okayama University, Kurashiki, Japan.ORCID http://orcid.org/0000-0002-3868-2380
Kazuhiro SatoInstitute of Plant Science and Resources, Okayama University, Kurashiki, Japan.ORCID http://orcid.org/0000-0001-8818-5203
Kenneth J ChalmersSchool of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, South Australia, Australia.
Peter LangridgeSchool of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, South Australia, Australia.ORCID http://orcid.org/0000-0001-9494-400X
Robbie WaughThe James Hutton Institute, Dundee, UK.ORCID http://orcid.org/0000-0003-1045-3065
Curtis J PozniakDepartment of Plant Sciences, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.ORCID http://orcid.org/0000-0002-7536-3856
Uwe ScholzLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID http://orcid.org/0000-0001-6113-3518
Klaus F X MayerPlant Genome and Systems Biology (PGSB), Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.ORCID http://orcid.org/0000-0001-6484-1077
Manuel SpannaglPlant Genome and Systems Biology (PGSB), Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.ORCID http://orcid.org/0000-0003-0701-7035
Chengdao LiWestern Barley Genetics Alliance, State Agricultural Biotechnology Centre, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, Western Australia, Australia. C.Li@murdoch.edu.au.ORCID http://orcid.org/0000-0002-9653-2700
Martin MascherLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany. mascher@ipk-gatersleben.de.ORCID http://orcid.org/0000-0001-6373-6013
Nils SteinLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany. stein@ipk-gatersleben.de.ORCID http://orcid.org/0000-0003-3011-8731
Funding
European Research Council
Abstract
Genetic diversity is key to crop improvement. Owing to pervasive genomic structural variation, a single reference genome assembly cannot capture the full complement of sequence diversity of a crop species (known as the 'pan-genome'
Indexed as
InternationalityMutationPlant BreedingChromosome InversionChromosome MappingChromosomes, PlantGenetic LociGenome, PlantGenotypeHordeumPolymorphism, GeneticReference StandardsSeed BankSequence InversionWhole Genome Sequencing
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.