Evidence map›Paper›PMID 33239753›Full record

ArticleCommunications biology2020

Photosensitive tyrosine analogues unravel site-dependent phosphorylation in TrkA initiated MAPK/ERK signaling.

Shu Zhao, Jia Shi, Guohua Yu, Dali Li, Meng Wang, Chonggang Yuan, Huihui Zhou, Amirabbas Parizadeh, Zhenlin Li, Min-Xin Guan and 1 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Shu ZhaoShanghai Key Laboratory of Brain Functional Genomics, Ministry of Education, East China Normal University (ECNU), Shanghai, 200062, China.ORCID 0000-0002-0889-6644
Jia ShiDepartment of Anesthesiology, State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100037, China.ORCID 0000-0001-5786-895X
Guohua YuShanghai Key Laboratory of Brain Functional Genomics, Ministry of Education, East China Normal University (ECNU), Shanghai, 200062, China.
Dali LiShanghai Key Laboratory of Brain Functional Genomics, Ministry of Education, East China Normal University (ECNU), Shanghai, 200062, China.ORCID 0000-0002-0046-8493
Meng WangDivision of Medical Genetics and Genomics, the Children's Hospital, Institute of Genetics, Zhejiang University School of Medicine, Hangzhou, Zhejiang, China.
Chonggang YuanShanghai Key Laboratory of Brain Functional Genomics, Ministry of Education, East China Normal University (ECNU), Shanghai, 200062, China.
Huihui ZhouBrain Cognition and Brain Disease Institute (BCBDI), Shenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research Institutions, Guangdong Provincial Key Laboratory of Brain Connectome and Behavior, CAS Key Laboratory of Brain Connectome and Manipulation, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China.
Amirabbas ParizadehUMR 7238 (LCQB unit), Centre National de la Recherche Scientifique (CNRS), Institut National de la Sante et de la Recherche Medicale (INSERM), Institute of Biology, Paris-Seine (IBPS), Sorbonne University, 75005, Paris, France.
Zhenlin LiUMR 7238 (LCQB unit), Centre National de la Recherche Scientifique (CNRS), Institut National de la Sante et de la Recherche Medicale (INSERM), Institute of Biology, Paris-Seine (IBPS), Sorbonne University, 75005, Paris, France.
Min-Xin GuanDivision of Medical Genetics and Genomics, the Children's Hospital, Institute of Genetics, Zhejiang University School of Medicine, Hangzhou, Zhejiang, China.ORCID 0000-0001-5067-6736
Shixin YeUMR 7238 (LCQB unit), Centre National de la Recherche Scientifique (CNRS), Institut National de la Sante et de la Recherche Medicale (INSERM), Institute of Biology, Paris-Seine (IBPS), Sorbonne University, 75005, Paris, France. shixin.ye-lehmann@inserm.fr.ORCID 0000-0002-9254-9409
East China Normal University · CNCentre National de la Recherche Scientifique · FRChildren's Hospital of Zhejiang University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNShenzhen Institutes of Advanced Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tyrosine kinase A (TrkA) is a membrane receptor which, upon ligand binding, activates several pathways including MAPK/ERK signaling, implicated in a spectrum of human pathologies; thus, TrkA is an emerging therapeutic target in treatment of neuronal diseases and cancer. However, mechanistic insights into TrKA signaling are lacking due to lack of site-dependent phosphorylation control. Here we engineer two light-sensitive tyrosine analogues, namely p-azido-L-phenylalanine (AzF) and the caged-tyrosine (ONB), through amber codon suppression to optically manipulate the phosphorylation state of individual intracellular tyrosines in TrkA. We identify TrkA-AzF and ONB mutants, which can activate the ERK pathway in the absence of NGF ligand binding through light control. Our results not only reveal how TrkA site-dependent phosphorylation controls the defined signaling process, but also extend the genetic code expansion technology to enable regulation of receptor-type kinase activation by optical control at the precision of a single phosphorylation site. It paves the way for comprehensive analysis of kinase-associated pathways as well as screening of compounds intervening in a site-directed phosphorylation pathway for targeted therapy.

Indexed as

Fluorescent DyesReceptor, trkATyrosineAzidesHEK293 CellsHumansMAP Kinase Signaling SystemPhosphorylationAzidesFluorescent DyesReceptor, trkATyrosine

Identifiers

PMID33239753
PMCPMC7689462
OpenAlexW3107259827

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.