Evidence map›Paper›PMID 33237941›Full record

ArticlePloS one2020

Diversity of bacteria populations associated with different thallus regions of the brown alga Laminaria digitata.

Maureen W Ihua, Jamie A FitzGerald, Freddy Guihéneuf, Stephen A Jackson, Marcus J Claesson, Dagmar B Stengel, Alan D W Dobson

Abstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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  13. TheFrontiers in microbiology · 2022
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Maureen W IhuaSchool of Microbiology, University College Cork, Cork, Ireland.
Jamie A FitzGeraldSchool of Microbiology, University College Cork, Cork, Ireland.
Freddy GuihéneufSAS inalve, Villefranche-sur-Mer, France.
Stephen A JacksonSchool of Microbiology, University College Cork, Cork, Ireland.ORCID 0000-0001-7869-9032
Marcus J ClaessonSchool of Microbiology, University College Cork, Cork, Ireland.
Dagmar B StengelBotany and Plant Science, School of Natural Sciences, Ryan Institute for Environmental, Marine and Energy Research, National University of Ireland Galway, Galway, Ireland.ORCID 0000-0001-5871-9550
Alan D W DobsonSchool of Microbiology, University College Cork, Cork, Ireland.ORCID 0000-0002-7713-5574

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stipitate kelp species such as Laminaria digitata dominate most cold-water subtidal rocky shores and form underwater forests which are among the most productive coastal systems worldwide. Laminaria also sustains rich bacterial communities which offer a variety of biotechnological applications. However, to date, in-depth studies on the diversity and uniqueness of bacterial communities associated with this macroalgal species, their ecological role and their interactions with the alga are under-represented. To address this, the epibacterial populations associated with different thallus regions (holdfast, stipe, meristem, blade) of this brown seaweed were investigated using high-throughput Illumina sequencing of the 16S rRNA genes. The results show that epibacterial communities of the brown seaweed are significantly different and specific to the thallus region, with the shared bacterial population comprising of only 1.1% of the total amplicon sequence variants. The diverse holdfast and blade tissues formed distinct clusters while the meristem and stipe regions are more closely related. The data obtained further supports the hypothesis that macroalgal bacterial communities are shaped by morphological niches and display specificity.

Indexed as

BacteriaGenes, BacterialGenes, rRNALaminariaMicrobial ConsortiaRNA, BacterialRNA, Ribosomal, 16SRNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID33237941
PMCPMC7688147

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.