Evidence map›Paper›PMID 33232597›Full record

ArticleEndocrinology and metabolism (Seoul, Korea)2020

Identification of Novel Genetic Variants Related to Trabecular Bone Score in Community-Dwelling Older Adults.

Sung Hye Kong, Ji Won Yoon, Jung Hee Kim, JooYong Park, Jiyeob Choi, Ji Hyun Lee, A Ram Hong, Nam H Cho, Chan Soo Shin

Open access · diamondAbstract read
In one paragraph

Article in Endocrinology and metabolism (Seoul, Korea), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Sung Hye KongDepartment of Internal Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Korea.
Ji Won YoonDepartment of Internal Medicine, Seoul National University Hospital Healthcare System Gangnam Center, Seoul, Korea.
Jung Hee KimDepartment of Internal Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Korea.
JooYong ParkDepartment of Preventive Medicine, Seoul National University College of Medicine, Seoul, Korea.
Jiyeob ChoiDepartment of Preventive Medicine, Seoul National University College of Medicine, Seoul, Korea.
Ji Hyun LeeDepartment of Internal Medicine, Veterans Health Service Medical Center, Seoul, Korea.
A Ram HongDepartment of Internal Medicine, Chonnam National University Hwasun Hospital, Hwasun, Korea.
Nam H ChoDepartment of Preventive Medicine, Ajou University School of Medicine, Suwon, Korea.
Chan Soo ShinDepartment of Internal Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul, Korea.
Seoul National University Hospital · KRSeoul National University · KRAjou University · KRChonnam National University Hwasun Hospital · KRVeterans Health Service Medical Center · KR

Funding

Korean Health Technology R&D Project A092077
6 · The paper itself

Abstract

backgroundAs the genetic variants of trabecular bone microarchitecture are not well-understood, we performed a genome-wide association study to identify genetic determinants of bone microarchitecture analyzed by trabecular bone score (TBS).

methodsTBS-associated genes were discovered in the Ansung cohort (discovery cohort), a community-based rural cohort in Korea, and then validated in the Gene-Environment Interaction and Phenotype (GENIE) cohort (validation cohort), consisting of subjects who underwent health check-up programs. In the discovery cohort, 2,451 participants were investigated for 1.42 million genotyped and imputed markers.

resultsIn the validation cohort, identified as significant variants were evaluated in 2,733 participants. An intronic variant in iroquois homeobox 3 (IRX3), rs1815994, was significantly associated with TBS in men (P=3.74E-05 in the discovery cohort, P=0.027 in the validation cohort). Another intronic variant in mitogen-activated protein kinase kinase 5 (MAP2K5), rs11630730, was significantly associated with TBS in women (P=3.05E-09 in the discovery cohort, P=0.041 in the validation cohort). Men with the rs1815994 variant and women with the rs11630730 variant had lower TBS and lumbar spine bone mineral density. The detrimental effects of the rs1815994 variant in men and rs11630730 variant in women were also identified in association analysis (β=-0.0281, β=-0.0465, respectively).

conclusionIn this study, the rs1815994 near IRX3 in men and rs11630730 near MAP2K5 in women were associated with deterioration of the bone microarchitecture. It is the first study to determine the association of genetic variants with TBS. Further studies are needed to confirm our findings and identify additional variants contributing to the trabecular bone microarchitecture.

Indexed as

Absorptiometry, PhotonAdultAgedBone DensityCancellous BoneCohort StudiesFemaleGenetic VariationGenome-Wide Association StudyHomeodomain ProteinsHumansIndependent LivingLinear ModelsLumbar VertebraeMaleMAP Kinase Kinase 5Homeodomain ProteinsIRX3 protein, humanMAP2K5 protein, humanMAP Kinase Kinase 5Transcription FactorsCohort studiesGenes, homeoboxGenome-wide association study

Identifiers

PMID33232597
PMCPMC7803610
OpenAlexW3110410699

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.