Evidence map›Paper›PMID 33228223›Full record

ArticleInternational journal of molecular sciences2020

Phylostratic Shift of Whole-Genome Duplications in Normal Mammalian Tissues towards Unicellularity Is Driven by Developmental Bivalent Genes and Reveals a Link to Cancer.

Olga V Anatskaya, Alexander E Vinogradov, Ninel M Vainshelbaum, Alessandro Giuliani, Jekaterina Erenpreisa

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. Tracing Genetic Images Formed During Evolution.International journal of molecular sciences · 2026
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  9. The evolutionary cancer gene network theory versus embryogenic hypotheses.Medical oncology (Northwood, London, England) · 2023
    Article
  10. Article
  11. Spatial-Temporal Genome Regulation in Stress-Response and Cell-Fate Change.International journal of molecular sciences · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Olga V AnatskayaDepartment of Bioinformatics and Functional Genomics, Institute of Cytology, Russian Academy of sciences, 194064 St. Petersburg, Russia.ORCID 0000-0003-4538-8056
Alexander E VinogradovDepartment of Bioinformatics and Functional Genomics, Institute of Cytology, Russian Academy of sciences, 194064 St. Petersburg, Russia.ORCID 0000-0001-5540-8896
Ninel M VainshelbaumDepartment of Oncology, Latvian Biomedical Research and Study Centre, Cancer Research Division, LV-1067 Riga, Latvia.
Alessandro GiulianiIstituto Superiore di Sanità, 00161 Rome, Italy.ORCID 0000-0002-4640-804X
Jekaterina ErenpreisaDepartment of Oncology, Latvian Biomedical Research and Study Centre, Cancer Research Division, LV-1067 Riga, Latvia.ORCID 0000-0002-2870-7775
Institute of Cytology · RULatvian Biomedical Research and Study Centre · LVIstituto Superiore di Sanità · IT

Funding

European Regional Development Fund (ERDF) 1.1.1.1/18/A/099Institute of Cytology Director's Fund 12Natural Sciences PhD Student Scholarship from the University of Latvia Foundation XX
6 · The paper itself

Abstract

Tumours were recently revealed to undergo a phylostratic and phenotypic shift to unicellularity. As well, aggressive tumours are characterized by an increased proportion of polyploid cells. In order to investigate a possible shared causation of these two features, we performed a comparative phylostratigraphic analysis of ploidy-related genes, obtained from transcriptomic data for polyploid and diploid human and mouse tissues using pairwise cross-species transcriptome comparison and principal component analysis. Our results indicate that polyploidy shifts the evolutionary age balance of the expressed genes from the late metazoan phylostrata towards the upregulation of unicellular and early metazoan phylostrata. The up-regulation of unicellular metabolic and drug-resistance pathways and the downregulation of pathways related to circadian clock were identified. This evolutionary shift was associated with the enrichment of ploidy with bivalent genes (

Indexed as

Gene Expression Regulation, NeoplasticGenomePloidiesAnimalsAntineoplastic AgentsCarcinogenesisCircadian Rhythm Signaling Peptides and ProteinsDrug Resistance, NeoplasmEpigenesis, GeneticGene DuplicationHumansMetabolic Networks and PathwaysMiceNeoplasm ProteinsNeoplasmsOncogenesAntineoplastic AgentsCircadian Rhythm Signaling Peptides and ProteinsMYC protein, humanNeoplasm ProteinsProto-Oncogene Proteins c-mycbivalent genescancerearly multicellularityembryonalitypolyploidyunicellularityviral-origin oncogenes

Identifiers

PMID33228223
PMCPMC7699474
OpenAlexW3098898175

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.