Evidence map›Paper›PMID 33227031›Full record

ArticlePloS one2020

Burkholderia collagen-like protein 8, Bucl8, is a unique outer membrane component of a putative tetrapartite efflux pump in Burkholderia pseudomallei and Burkholderia mallei.

Megan E Grund, Soo J Choi, Dudley H McNitt, Mariette Barbier, Gangqing Hu, P Rocco LaSala, Christopher K Cote, Rita Berisio, Slawomir Lukomski

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Vaccines · 2024
    Review
  3. Article
  4. Prokaryotic Collagen-Like Proteins as Novel Biomaterials.Frontiers in bioengineering and biotechnology · 2022
    Review
  5. Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Megan E GrundDepartment of Microbiology, Immunology and Cell Biology, School of Medicine, West Virginia University, Morgantown, WV, United States of America.ORCID 0000-0003-4103-3151
Soo J ChoiDepartment of Microbiology, Immunology and Cell Biology, School of Medicine, West Virginia University, Morgantown, WV, United States of America.
Dudley H McNittDepartment of Microbiology, Immunology and Cell Biology, School of Medicine, West Virginia University, Morgantown, WV, United States of America.ORCID 0000-0001-8592-4015
Mariette BarbierDepartment of Microbiology, Immunology and Cell Biology, School of Medicine, West Virginia University, Morgantown, WV, United States of America.ORCID 0000-0002-3250-3636
Gangqing HuDepartment of Microbiology, Immunology and Cell Biology, School of Medicine, West Virginia University, Morgantown, WV, United States of America.ORCID 0000-0001-5453-6888
P Rocco LaSalaDepartment of Pathology, West Virginia University, Morgantown, WV, United States of America.
Christopher K CoteBacteriology Division, The United States Army Medical Research Institute of Infectious Diseases (USAMRIID), Frederick, MD, United States of America.
Rita BerisioInstitute of Biostructures and Bioimaging, National Research Council, Naples, Italy.
Slawomir LukomskiDepartment of Microbiology, Immunology and Cell Biology, School of Medicine, West Virginia University, Morgantown, WV, United States of America.ORCID 0000-0002-5159-1838
West Virginia University · USInstitute of Biostructure and Bioimaging · ITUnited States Army Medical Research Institute of Infectious Diseases · US

Funding

West Virginia IDEA-CTRU54GM104942 · NIGMS · WEST VIRGINIA UNIVERSITY · PI Laura F. Gibson · 2012 to 2026
$81.0M
WV INBRE: The Inhibitor of Growth Family Member 4 (ING4) inhibits L-Type Amino Acid Transporter 1 (LAT1) expression to suppress Breast CancerP20GM103434 · NIGMS · MARSHALL UNIVERSITY · PI Travis Salisbury · 2012 to 2026
$61.1M
NIGMS NIH HHS P20 GM103434NIGMS NIH HHS U54 GM104942
6 · The paper itself

Abstract

Bacterial efflux pumps are an important pathogenicity trait because they extrude a variety of xenobiotics. Our laboratory previously identified in silico Burkholderia collagen-like protein 8 (Bucl8) in the hazardous pathogens Burkholderia pseudomallei and Burkholderia mallei. We hypothesize that Bucl8, which contains two predicted tandem outer membrane efflux pump domains, is a component of a putative efflux pump. Unique to Bucl8, as compared to other outer membrane proteins, is the presence of an extended extracellular region containing a collagen-like (CL) domain and a non-collagenous C-terminus (Ct). Molecular modeling and circular dichroism spectroscopy with a recombinant protein, corresponding to this extracellular CL-Ct portion of Bucl8, demonstrated that it adopts a collagen triple helix, whereas functional assays screening for Bucl8 ligands identified binding to fibrinogen. Bioinformatic analysis of the bucl8 gene locus revealed it resembles a classical efflux-pump operon. The bucl8 gene is co-localized with downstream fusCDE genes encoding fusaric acid (FA) resistance, and with an upstream gene, designated as fusR, encoding a LysR-type transcriptional regulator. Using reverse transcriptase (RT)-qPCR, we defined the boundaries and transcriptional organization of the fusR-bucl8-fusCDE operon. We found exogenous FA induced bucl8 transcription over 80-fold in B. pseudomallei, while deletion of the entire bucl8 locus decreased the minimum inhibitory concentration of FA 4-fold in its isogenic mutant. We furthermore showed that the putative Bucl8-associated pump expressed in the heterologous Escherichia coli host confers FA resistance. On the contrary, the Bucl8-associated pump did not confer resistance to a panel of clinically-relevant antimicrobials in Burkholderia and E. coli. We finally demonstrated that deletion of the bucl8-locus drastically affects the growth of the mutant in L-broth. We determined that Bucl8 is a component of a novel tetrapartite efflux pump, which confers FA resistance, fibrinogen binding, and optimal growth.

Indexed as

Bacterial Outer Membrane ProteinsBurkholderiaBurkholderia malleiBurkholderia pseudomalleiCollagenDrug Resistance, Multiple, BacterialEscherichia coliEscherichia coli ProteinsGenes, BacterialMembrane Transport ProteinsOperonTranscription FactorsBacterial Outer Membrane ProteinsCollagenEscherichia coli ProteinsMembrane Transport ProteinsTranscription Factors

Identifiers

PMID33227031
PMCPMC7682875
OpenAlexW3108270799

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.