Evidence map›Paper›PMID 33225520›Full record

ArticleTraffic (Copenhagen, Denmark)2021

Genetically encoded multimode reporter of adaptor complex 3 traffic in budding yeast.

Rachael L Plemel, Greg Odorizzi, Alexey J Merz

Open access · bronzeAbstract read
In one paragraph

Article in Traffic (Copenhagen, Denmark), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Rachael L PlemelDepartment of Biochemistry, University of Washington, Seattle, Washington.
Greg OdorizziDepartment of Molecular, Cellular, and Developmental Biology, University of Colorado, Boulder, Colorado.
Alexey J MerzDepartment of Biochemistry, University of Washington, Seattle, Washington.ORCID 0000-0003-2177-6492
University of Washington · USUniversity of Colorado Boulder · US

Funding

Dynamics of Endomembrane Docking and FusionR01GM077349 · NIGMS · UNIVERSITY OF WASHINGTON · PI MERZ, ALEXEY JARRELL · 2006 to 2024
$6.1M
Regulation of ESCRT-III Activity in YeastR01GM111335 · NIGMS · UNIVERSITY OF COLORADO · PI ODORIZZI, CHARLES G · 2014 to 2022
$2.6M
MECHANISMS OF AP-3 FUNCTION IN VESICLE FORMATION AND GOLGI MATURATIONR01GM130644 · NIGMS · UNIVERSITY OF WASHINGTON · PI MERZ, ALEXEY JARRELL, ODORIZZI, CHARLES G · 2019 to 2022
$1.9M
NIGMS NIH HHS R01 GM077349NIGMS NIH HHS R01 GM111335NIGMS NIH HHS R01 GM130644NIH HHS GM077349NIH HHS GM111335NIH HHS GM130644
6 · The paper itself

Abstract

AP-3 (adaptor complex 3) mediates traffic from the late Golgi or early endosomes to late endosomal compartments. In mammals, mutations in AP-3 cause Hermansky-Pudlak syndrome type 2, cyclic neutropenias, and a form of epileptic encephalopathy. In budding yeast, AP-3 carries cargo directly from the trans-Golgi to the lysosomal vacuole. Despite the pathway's importance and its discovery two decades ago, rapid screens and selections for AP-3 mutants have not been available. We now report GNSI, a synthetic, genetically encoded reporter that allows rapid plate-based assessment of AP-3 functional deficiency, using either chromogenic or growth phenotype readouts. This system identifies defects in both the formation and consumption of AP-3 carrier vesicles and is adaptable to high-throughput screening or selection in both plate array and liquid batch culture formats. Episomal and integrating plasmids encoding GNSI have been submitted to the Addgene repository.

Indexed as

Hermanski-Pudlak SyndromeSaccharomycetalesAdaptor Protein Complex 3AnimalsEndosomesTransport VesiclesVacuolesAdaptor Protein Complex 3invertaselysosomeorganellesaccharomycesvesicle coat

Identifiers

PMID33225520
PMCPMC8259613
OpenAlexW3108124776

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.