Evidence map›Paper›PMID 33224264›Full record

ArticleFuture virology2020

Perversely expressed long noncoding RNAs can alter host response and viral proliferation in SARS-CoV-2 infection.

Rafeed Rahman Turjya, Md Abdullah-Al-Kamran Khan, Abul Bashar Mir Md Khademul Islam

Open access · greenAbstract read
In one paragraph

Article in Future virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 48 citations in OpenAlex.

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  10. The regulation of lncRNAs and miRNAs in SARS-CoV-2 infection.Frontiers in cell and developmental biology · 2023
    Review
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  12. Inferring Recombination Events in SARS-CoV-2 Variants In Silico.Advances in experimental medicine and biology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Rafeed Rahman TurjyaDepartment of Genetic Engineering & Biotechnology, University of Dhaka, Dhaka, Bangladesh.ORCID https://orcid.org/0000-0002-2018-6792
Md Abdullah-Al-Kamran KhanDepartment of Mathematics & Natural Sciences, BRAC University, Dhaka, Bangladesh.ORCID https://orcid.org/0000-0002-3484-6333
Abul Bashar Mir Md Khademul IslamDepartment of Genetic Engineering & Biotechnology, University of Dhaka, Dhaka, Bangladesh.ORCID https://orcid.org/0000-0002-7274-0855
University of Dhaka · BDBRAC University · BD

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRegulatory roles of long noncoding RNAs (lncRNAs) during viral infection has become more evident in last decade, but are yet to be explored for SARS-CoV-2. MATERIALS &

methodsWe analyzed RNA-seq dataset of SARS-CoV-2 infected lung epithelial cells to identify differentially expressed genes.

resultsOur analyses uncover 21 differentially expressed lncRNAs broadly involved in cell survival and regulation of gene expression. These lncRNAs can directly interact with six differentially expressed protein-coding genes, and ten host genes that interact with SARS-CoV-2 proteins. Also, they can block the suppressive effect of nine microRNAs induced in viral infections.

conclusionOur investigation determines that deregulated lncRNAs in SARS-CoV-2 infection are involved in viral proliferation, cellular survival, and immune response, ultimately determining disease outcome.

Indexed as

COVID-19lncRNAlong noncoding RNAmiRNASARS-CoV-2viral pathogenesis

Identifiers

PMID33224264
PMCPMC7664154
OpenAlexW3097373247

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.