Evidence map›Paper›PMID 33222514›Full record

ArticleBioTechniques2021

Increased sensitivity using real-time dPCR for detection of SARS-CoV-2.

Kyra Duong, Jiajia Ou, Zhaoliang Li, Zhaoqing Lv, Hao Dong, Tao Hu, Yunyun Zhang, Ava Hanna, Skyler Gordon, Gogce Crynen and 3 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in BioTechniques, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.2field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Kyra DuongGnomegen, 6440 Lusk Blvd, D207, San Diego, CA 92121, USA.
Jiajia OuQuestGenomics, 12 E. Mozhou Rd, U-Park, Rm P308, Jiangning, Nanjing, Jiangsu, PR China.
Zhaoliang LiQuestGenomics, 12 E. Mozhou Rd, U-Park, Rm P308, Jiangning, Nanjing, Jiangsu, PR China.
Zhaoqing LvQuestGenomics, 12 E. Mozhou Rd, U-Park, Rm P308, Jiangning, Nanjing, Jiangsu, PR China.
Hao DongQuestGenomics, 12 E. Mozhou Rd, U-Park, Rm P308, Jiangning, Nanjing, Jiangsu, PR China.
Tao HuQuestGenomics, 12 E. Mozhou Rd, U-Park, Rm P308, Jiangning, Nanjing, Jiangsu, PR China.
Yunyun ZhangQuestGenomics, 12 E. Mozhou Rd, U-Park, Rm P308, Jiangning, Nanjing, Jiangsu, PR China.
Ava HannaGnomegen, 6440 Lusk Blvd, D207, San Diego, CA 92121, USA.
Skyler GordonGenomics Core Facility, Scripps Research, 10550 N Torrey Pines Road, La Jolla, CA, USA.
Gogce CrynenBioinformatics Core Facility, Scripps Research, 120 Scripps Way, Jupiter, FL 33458, USA.ORCID 0000-0001-6066-9900
Steven R HeadGenomics Core Facility, Scripps Research, 10550 N Torrey Pines Road, La Jolla, CA, USA.
Phillip OrdoukhanianGenomics Core Facility, Scripps Research, 10550 N Torrey Pines Road, La Jolla, CA, USA.
Yan WangGnomegen, 6440 Lusk Blvd, D207, San Diego, CA 92121, USA.
Nanjing Jiangning Hospital · CNScripps Research Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A real-time dPCR system was developed to improve the sensitivity, specificity and quantification accuracy of end point dPCR. We compared three technologies - real-time qPCR, end point dPCR and real-time dPCR - in the context of SARS-CoV-2. Some improvement in limit of detection was obtained with end point dPCR compared with real-time qPCR, and the limit of detection was further improved with the newly developed real-time dPCR technology through removal of false-positive signals. Real-time dPCR showed increased linear dynamic range compared with end point dPCR based on quantitation from amplification curves. Real-time dPCR can improve the performance of TaqMan assays beyond real-time qPCR and end point dPCR with better sensitivity and specificity, absolute quantification and a wider linear range of detection.

Indexed as

Real-Time Polymerase Chain ReactionCOVID-19COVID-19 Nucleic Acid TestingEndpoint DeterminationHumansSARS-CoV-2dPCRgene expressioninfectious disease diagnosticsqPCRreal-time digital PCRreal-time PCRSARS-CoV-2

Identifiers

PMID33222514
PMCPMC7888512
OpenAlexW3106623545

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.