Evidence map›Paper›PMID 33219682›Full record

ArticleNucleic acids research2021

FlyBase: updates to the Drosophila melanogaster knowledge base.

Aoife Larkin, Steven J Marygold, Giulia Antonazzo, Helen Attrill, Gilberto Dos Santos, Phani V Garapati, Joshua L Goodman, L Sian Gramates, Gillian Millburn, Victor B Strelets and 3 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 348 papers.

0numbers the graph read from it
0cells of the map it votes in
348citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

348 citing papers in PubMed.

  1. Article
  2. Gene model for the ortholog ofbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
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  5. Gene model for the ortholog ofbioRxiv : the preprint server for biology · 2026
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  6. Gene model for the ortholog ofbioRxiv : the preprint server for biology · 2026
    Article
  7. Gene model for the ortholog ofbioRxiv : the preprint server for biology · 2026
    Article
  8. Gene model for the ortholog ofbioRxiv : the preprint server for biology · 2026
    Article
  9. Gene model for the ortholog ofbioRxiv : the preprint server for biology · 2026
    Article
  10. Article
  11. Gene model for the ortholog ofbioRxiv : the preprint server for biology · 2026
    Article
  12. Gene model for the ortholog ofbioRxiv : the preprint server for biology · 2026
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  13. Article
  14. Article
  15. Gene model for the ortholog ofbioRxiv : the preprint server for biology · 2026
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  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

288 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Aoife LarkinDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Steven J MarygoldDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Giulia AntonazzoDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Helen AttrillDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Gilberto Dos SantosThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
Phani V GarapatiDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Joshua L GoodmanDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
L Sian GramatesThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
Gillian MillburnDepartment of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.
Victor B StreletsDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
Christopher J TaboneThe Biological Laboratories, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
Jim ThurmondDepartment of Biology, Indiana University, Bloomington, IN 47405, USA.
FlyBase Consortium

Funding

Resource Project CoreU41HG000739 · NHGRI · HARVARD UNIVERSITY · PI PERRIMON, NORBERT · 2014 to 2022
$32.3M
Medical Research Council MR/N030117/1NHGRI NIH HHS U41 HG000739
6 · The paper itself

Abstract

FlyBase (flybase.org) is an essential online database for researchers using Drosophila melanogaster as a model organism, facilitating access to a diverse array of information that includes genetic, molecular, genomic and reagent resources. Here, we describe the introduction of several new features at FlyBase, including Pathway Reports, paralog information, disease models based on orthology, customizable tables within reports and overview displays ('ribbons') of expression and disease data. We also describe a variety of recent important updates, including incorporation of a developmental proteome, upgrades to the GAL4 search tab, additional Experimental Tool Reports, migration to JBrowse for genome browsing and improvements to batch queries/downloads and the Fast-Track Your Paper tool.

Indexed as

Databases, GeneticAnimalsComputational BiologyDrosophila melanogasterGenes, InsectGenome, InsectGenomicsKnowledge BasesMolecular Sequence AnnotationSearch EngineWeb Browser

Identifiers

PMID33219682
PMCPMC7779046

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.