Evidence map›Paper›PMID 33219586›Full record

ArticlePharmacoepidemiology and drug safety2021

Developing algorithms for identifying major structural birth defects using automated electronic health data.

Elyse O Kharbanda, Gabriela Vazquez-Benitez, Malini B DeSilva, Alicen B Spaulding, Matthew F Daley, Allison L Naleway, Stephanie A Irving, Nicola P Klein, Hung Fu Tseng, Lisa A Jackson and 5 more

Abstract read
In one paragraph

Article in Pharmacoepidemiology and drug safety, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 2 syntheses or guidelines pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Elyse O KharbandaHealthPartners Institute, Minneapolis, Minnesota, USA.ORCID 0000-0002-3359-5843
Gabriela Vazquez-BenitezHealthPartners Institute, Minneapolis, Minnesota, USA.
Malini B DeSilvaHealthPartners Institute, Minneapolis, Minnesota, USA.
Alicen B SpauldingChildren's Minnesota Research Institute, Minneapolis, Minnesota, USA.
Matthew F DaleyInstitute for Health Research, Kaiser Permanente Colorado, Denver, Colorado, USA.ORCID 0000-0003-1309-4096
Allison L NalewayCenter for Health Research, Kaiser Permanente Northwest, Portland, Oregon, USA.
Stephanie A IrvingCenter for Health Research, Kaiser Permanente Northwest, Portland, Oregon, USA.
Nicola P KleinKaiser Permanente Vaccine Study Center, Oakland, California, USA.
Hung Fu TsengKaiser Permanente Southern California, Los Angeles, California, USA.
Lisa A JacksonKaiser Permanente Washington, Seattle, Washington, USA.
Simon J HambidgeAmbulatory Care Services, Denver Health, Denver, Colorado, USA.
Oluwatosin OlaiyaMarshfield Clinic Research Institute, Marshfield, Wisconsin, USA.
Catherine A PanozzoHarvard Pilgrim Healthcare Institute, Boston, Massachusetts, USA.ORCID 0000-0002-4957-8204
Tanya R MyersCenters for Disease Control and Prevention, Atlanta, Georgia, USA.
Paul A RomittiUniversity of Iowa, Iowa City, Iowa, USA.

Funding

CDC HHSIntramural CDC HHS CC999999
6 · The paper itself

Abstract

purposeGiven the 2015 transition to International Classification of Diseases, Tenth Revision, Clinical Modification (ICD-10-CM) diagnostic coding, updates to our previously published algorithms for major structural birth defects (BDs) were necessary. Aims of this study were to update, validate, and refine algorithms for identifying selected BDs, and then to use these algorithms to describe BD prevalence in the vaccine safety datalink (VSD) population.

methodsWe converted our ICD-9-CM list of selected BDs to ICD-10-CM using available crosswalks with manual review of codes. We identified, chart reviewed, and adjudicated a sample of infants in the VSD with ≥2 ICD-10-CM diagnoses for one of seven common BDs. Positive predictive values (PPVs) were calculated; for BDs with suboptimal PPV, algorithms were refined. Final automated algorithms were applied to a cohort of live births delivered 10/1/2015-9/30/2017 at eight VSD sites to estimate BD prevalence. This research was approved by the HealthPartners Institutional Review Board, by all participating VSD sites, and by the CDC, with a waiver of informed consent.

resultsOf 573 infants with ≥2 diagnoses for a targeted BD, on adjudication, we classified 399 (69.6%) as probable cases, 31 (5.4%) as possible cases and 143 (25.0%) as not having the targeted BD. PPVs for the final BD algorithms ranged from 0.76 (hypospadias) to 1.0 (gastroschisis). Among 212 857 births over 2 years following transition to ICD-10-CM coding, prevalence for the full list of selected defects in the VSD was 1.8%.

conclusionsAlgorithms can identify infants with selected BDs using automated healthcare data with reasonable accuracy. Our updated algorithms can be used in observational studies of maternal vaccine safety and may be adapted for use in other surveillance systems.

Indexed as

Electronic Health RecordsInternational Classification of DiseasesAlgorithmsCohort StudiesHumansInfantMalePrevalencebirth defectsICD-10pharmacoepidemiologypregnancy

Identifiers

PMID33219586
PMCPMC9116134

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.