Evidence map›Paper›PMID 33216293›Full record

ArticleTheory in biosciences = Theorie in den Biowissenschaften2020

Edge-based analysis of networks: curvatures of graphs and hypergraphs.

Marzieh Eidi, Amirhossein Farzam, Wilmer Leal, Areejit Samal, Jürgen Jost

Abstract read
In one paragraph

Article in Theory in biosciences = Theorie in den Biowissenschaften, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Spaces of mathematical chemistry.Theory in biosciences = Theorie in den Biowissenschaften · 2024
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Marzieh EidiMax Planck Institute for Mathematics in the Sciences, 04103, Leipzig, Germany.ORCID http://orcid.org/0000-0003-2438-5200
Amirhossein FarzamMax Planck Institute for Mathematics in the Sciences, 04103, Leipzig, Germany.ORCID http://orcid.org/0000-0003-1768-7382
Wilmer LealMax Planck Institute for Mathematics in the Sciences, 04103, Leipzig, Germany.ORCID http://orcid.org/0000-0002-9028-8815
Areejit SamalThe Institute of Mathematical Sciences (IMSc), Homi Bhabha National Institute (HBNI), Chennai, 600113, India.ORCID http://orcid.org/0000-0002-6796-9604
Jürgen JostMax Planck Institute for Mathematics in the Sciences, 04103, Leipzig, Germany. jjost@mis.mpg.de.ORCID http://orcid.org/0000-0001-5258-6590

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The relations, rather than the elements, constitute the structure of networks. We therefore develop a systematic approach to the analysis of networks, modelled as graphs or hypergraphs, that is based on structural properties of (hyper)edges, instead of vertices. For that purpose, we utilize so-called network curvatures. These curvatures quantify the local structural properties of (hyper)edges, that is, how, and how well, they are connected to others. In the case of directed networks, they assess the input they receive and the output they produce, and relations between them. With those tools, we can investigate biological networks. As examples, we apply our methods here to protein-protein interaction, transcriptional regulatory and metabolic networks.

Indexed as

Gene Expression RegulationMetabolic Networks and Pathways

Identifiers

PMID33216293
PMCPMC7719116

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.