Evidence map›Paper›PMID 33213546›Full record

ArticleEpidemiology and infection2020

Prevalence of Diarrheagenic

C Pimentel Sobrinho, J Lima Godoi, F Neves Souza, C Graco Zeppelini, V Espirito Santo, D Carvalho Santiago, R Sady Alves, H Khalil, T Carvalho Pereira, M Hanzen Pinna and 4 more

Open access · goldAbstract read
In one paragraph

Article in Epidemiology and infection, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Emergence and Comparative Genome Analysis ofInternational journal of molecular sciences · 2024
    Article
  6. Zoonotic potential and prevalence ofInfection ecology & epidemiology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 3 countries.

C Pimentel SobrinhoBiology Institute, Federal University of Bahia, UFBA, Salvador, Brazil.ORCID 0000-0002-6234-332X
J Lima GodoiBiology Institute, Federal University of Bahia, UFBA, Salvador, Brazil.
F Neves SouzaBiology Institute, Federal University of Bahia, UFBA, Salvador, Brazil.
C Graco ZeppeliniBiology Institute, Federal University of Bahia, UFBA, Salvador, Brazil.ORCID 0000-0002-0490-4395
V Espirito SantoCollective Health Institute, Federal University of Bahia, UFBA, Salvador, Brazil.
D Carvalho SantiagoCollective Health Institute, Federal University of Bahia, UFBA, Salvador, Brazil.
R Sady AlvesSchool of Veterinary Medicine, Federal University of Bahia, UFBA, Salvador, Brazil.
H KhalilCollective Health Institute, Federal University of Bahia, UFBA, Salvador, Brazil.
T Carvalho PereiraCollective Health Institute, Federal University of Bahia, UFBA, Salvador, Brazil.
M Hanzen PinnaSchool of Veterinary Medicine, Federal University of Bahia, UFBA, Salvador, Brazil.
M BegonInstitute of Integrative Biology, University of Liverpool, Liverpool, UK.
S Machado CordeiroSchool of Pharmacy, Federal University of Bahia, UFBA, Salvador, Brazil.
J Neves ReisSchool of Pharmacy, Federal University of Bahia, UFBA, Salvador, Brazil.
F CostaCollective Health Institute, Federal University of Bahia, UFBA, Salvador, Brazil.
Universidade Federal da Bahia · BRUniversity of Liverpool · GB

Funding

Medical Research Council MR/P024084/1Wellcome TrustWellcome Trust 102330/Z/13/ZWellcome Trust 218987/Z/19/Z
6 · The paper itself

Abstract

Studies evaluating the occurrence of enteropathogenic bacteria in urban rats (Rattus spp.) are scarce worldwide, specifically in the urban environments of tropical countries. This study aims to estimate the prevalence of diarrhoeagenic Escherichia coli (DEC) and Salmonella spp. with zoonotic potential in urban slum environments. We trapped rats between April and June 2018 in Salvador, Brazil. We collected rectal swabs from Rattus spp., and cultured for E. coli and Salmonella spp., and screened E. coli isolates by polymerase chain reaction to identify pathotypes. E. coli were found in 70% of Rattus norvegicus and were found in four Rattus rattus. DEC were isolated in 31.3% of the 67 brown rats (R. norvegicus). The pathotypes detected more frequently were shiga toxin E. coli in 11.9%, followed by atypical enteropathogenic E. coli in 10.4% and enteroinvasive E. coli in 4.5%. From the five black rats (R. rattus), two presented DEC. Salmonella enterica was found in only one (1.4%) of 67 R. norvegicus. Our findings indicate that both R. norvegicus and R. rattus are host of DEC and, at lower prevalence, S. enterica, highlighting the importance of rodents as potential sources of pathogenic agents for humans.

Indexed as

ZoonosesAnimalsBrazilDiarrheaEnteropathogenic Escherichia coliEscherichia coli InfectionsFemaleMalePoverty AreasPrevalenceRatsRectumSalmonellaSalmonella Infections, AnimalUrban PopulationEnterobacteriaodentsR. norvegicusR. rattusZoonoses

Identifiers

PMID33213546
PMCPMC8167902
OpenAlexW3100892798

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.