Evidence map›Paper›PMID 33213279›Full record

ArticleSLAS technology2021

Adapting a Low-Cost and Open-Source Commercial Pipetting Robot for Nanoliter Liquid Handling.

E Enoch A W Councill, Nathanial B Axtell, Thy Truong, Yiran Liang, Adam L Aposhian, Kei G I Webber, Ying Zhu, Yongzheng Cong, Richard H Carson, Ryan T Kelly

Abstract read
In one paragraph

Article in SLAS technology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Rapid, One-Step Sample Processing for Label-Free Single-Cell Proteomics.Journal of the American Society for Mass Spectrometry · 2023
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

E Enoch A W CouncillDepartment of Chemistry and Biochemistry, Brigham Young University, Provo, UT, USA.
Nathanial B AxtellDepartment of Chemistry and Biochemistry, Brigham Young University, Provo, UT, USA.
Thy TruongDepartment of Chemistry and Biochemistry, Brigham Young University, Provo, UT, USA.
Yiran LiangDepartment of Chemistry and Biochemistry, Brigham Young University, Provo, UT, USA.
Adam L AposhianDepartment of Chemistry and Biochemistry, Brigham Young University, Provo, UT, USA.
Kei G I WebberDepartment of Chemistry and Biochemistry, Brigham Young University, Provo, UT, USA.
Ying ZhuEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, USA.
Yongzheng CongDepartment of Chemistry and Biochemistry, Brigham Young University, Provo, UT, USA.
Richard H CarsonDepartment of Chemistry and Biochemistry, Brigham Young University, Provo, UT, USA.
Ryan T KellyDepartment of Chemistry and Biochemistry, Brigham Young University, Provo, UT, USA.ORCID 0000-0002-3339-4443

Funding

Area A: In-Depth Proteome Mapping of the Tumor Microenvironment with Single-Cell ResolutionR33CA225248 · NCI · BRIGHAM YOUNG UNIVERSITY · PI KELLY, RYAN T · 2017 to 2017
$1.7M
Fully automated and ultra-high-throughput platform for in-depth single-cell proteomicsR01GM138931 · NIGMS · BRIGHAM YOUNG UNIVERSITY · PI KELLY, RYAN T · 2020 to 2023
$1.6M
NCI NIH HHS R33 CA225248NIGMS NIH HHS R01 GM138931
6 · The paper itself

Abstract

Low-volume liquid handling capabilities in bioanalytical workflows can dramatically improve sample processing efficiency and reduce reagent costs, yet many commercial nanoliter liquid handlers cost tens of thousands of dollars or more. We have successfully adapted a low-cost and open-source commercial pipetting robot, the Opentrons OT-1, to accurately aspirate and dispense nanoliter volumes. Based on fluorescence measurements, the modified OT-1 was able to reproducibly transfer 50 nL of water with less than 3% measurement error and 5% coefficient of variation (CV). For 15 nL transfers, the volume measurements indicated less than 4% error and 4% CV. We applied this platform to the preparation of low-nanogram proteomic samples for liquid chromatography-mass spectrometry analysis, demonstrating that the modified OT-1 is an effective platform for nanoliter liquid handling. At a total materials cost of less than $6000, including the commercial liquid handler and all modifications, this system is also far less expensive than other platforms with similar capabilities, placing automated nanoliter handling within reach of a far broader scientific community.

Indexed as

ProteomicsRoboticsChromatography, LiquidMass Spectrometryautomationliquid handlingmass spectrometrynanoPOTSOpentronssample preparation

Identifiers

PMID33213279
PMCPMC8143861

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.